Gene info for GFF6253 in Variovorax sp. SCN45

Annotation: Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, - strand, nucleotides 46,865 to 47,815
See nucleotide sequence around GFF6253 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6248 and GFF6249 overlap by 4 nucleotidesGFF6249 and GFF6250 overlap by 4 nucleotidesGFF6250 and GFF6251 are separated by 19 nucleotidesGFF6251 and GFF6252 are separated by 10 nucleotidesGFF6252 and GFF6253 are separated by 31 nucleotidesGFF6253 and GFF6254 are separated by 55 nucleotidesGFF6254 and GFF6255 are separated by 105 nucleotidesGFF6255 and GFF6256 overlap by 4 nucleotidesGFF6256 and GFF6257 overlap by 4 nucleotidesGFF6257 and GFF6258 overlap by 4 nucleotides GFF6248 - Site-specific recombinase, at 40,972 to 42,945 GFF6248 GFF6249 - Transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 42,942 to 44,213 GFF6249 GFF6250 - Glutamate--cysteine ligase-like protein YbdK, at 44,210 to 45,430 GFF6250 GFF6251 - hypothetical protein, at 45,450 to 46,019 GFF6251 GFF6252 - Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1), at 46,030 to 46,833 GFF6252 GFF6253 - Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1), at 46,865 to 47,815 GFF6253 GFF6254 - Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1), at 47,871 to 48,728 GFF6254 GFF6255 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase (EC 3.6.1.63), at 48,834 to 49,988 GFF6255 GFF6256 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37), at 49,985 to 50,698 GFF6256 GFF6257 - Phosphonates utilization ATP-binding protein PhnK, at 50,695 to 51,483 GFF6257 GFF6258 - Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase (EC 4.7.1.1), at 51,480 to 52,352 GFF6258
Locus Name Description Strand Phenotype
GFF6248 Site-specific recombinase + insig.
GFF6249 Transporter, monovalent cation:proton antiporter-2 (CPA2) family + strong
GFF6250 Glutamate--cysteine ligase-like protein YbdK + strong
GFF6251 hypothetical protein - insig.
GFF6252 Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1) - insig.
GFF6253 Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) - insig.
GFF6254 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) - insig.
GFF6255 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase (EC 3.6.1.63) - insig.
GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) - insig.
GFF6257 Phosphonates utilization ATP-binding protein PhnK - no data
GFF6258 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase (EC 4.7.1.1) - insig.

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