Gene info for GFF6248 in Variovorax sp. SCN45

Annotation: Site-specific recombinase
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, + strand, nucleotides 40,972 to 42,945
See nucleotide sequence around GFF6248 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6243 and GFF6244 are separated by 75 nucleotidesGFF6244 and GFF6245 are separated by 160 nucleotidesGFF6245 and GFF6246 overlap by 11 nucleotidesGFF6246 and GFF6247 are separated by 51 nucleotidesGFF6247 and GFF6248 are separated by 42 nucleotidesGFF6248 and GFF6249 overlap by 4 nucleotidesGFF6249 and GFF6250 overlap by 4 nucleotidesGFF6250 and GFF6251 are separated by 19 nucleotidesGFF6251 and GFF6252 are separated by 10 nucleotidesGFF6252 and GFF6253 are separated by 31 nucleotides GFF6243 - Ku domain protein, at 37,322 to 38,293 GFF6243 GFF6244 - Predicted deacylase, at 38,369 to 39,373 GFF6244 GFF6245 - no description, at 39,534 to 39,788 GFF6245 GFF6246 - Ribulose-phosphate 3-epimerase (EC 5.1.3.1), at 39,778 to 40,473 GFF6246 GFF6247 - ApaG protein, at 40,525 to 40,929 GFF6247 GFF6248 - Site-specific recombinase, at 40,972 to 42,945 GFF6248 GFF6249 - Transporter, monovalent cation:proton antiporter-2 (CPA2) family, at 42,942 to 44,213 GFF6249 GFF6250 - Glutamate--cysteine ligase-like protein YbdK, at 44,210 to 45,430 GFF6250 GFF6251 - hypothetical protein, at 45,450 to 46,019 GFF6251 GFF6252 - Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1), at 46,030 to 46,833 GFF6252 GFF6253 - Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1), at 46,865 to 47,815 GFF6253
Locus Name Description Strand Phenotype
GFF6243 Ku domain protein - insig.
GFF6244 Predicted deacylase - insig.
GFF6245 no description + insig.
GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) - strong
GFF6247 ApaG protein + insig.
GFF6248 Site-specific recombinase + insig.
GFF6249 Transporter, monovalent cation:proton antiporter-2 (CPA2) family + strong
GFF6250 Glutamate--cysteine ligase-like protein YbdK + strong
GFF6251 hypothetical protein - insig.
GFF6252 Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1) - insig.
GFF6253 Phosphonate ABC transporter substrate-binding protein PhnD (TC 3.A.1.9.1) - insig.

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