Gene info for GFF6242 in Variovorax sp. SCN45

Annotation: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, - strand, nucleotides 34,769 to 37,306
See nucleotide sequence around GFF6242 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6237 and GFF6238 overlap by 1 nucleotidesGFF6238 and GFF6239 are separated by 16 nucleotidesGFF6239 and GFF6240 are separated by 11 nucleotidesGFF6240 and GFF6241 are separated by 285 nucleotidesGFF6241 and GFF6242 are separated by 132 nucleotidesGFF6242 and GFF6243 are separated by 15 nucleotidesGFF6243 and GFF6244 are separated by 75 nucleotidesGFF6244 and GFF6245 are separated by 160 nucleotidesGFF6245 and GFF6246 overlap by 11 nucleotidesGFF6246 and GFF6247 are separated by 51 nucleotides GFF6237 - hypothetical protein, at 28,746 to 29,813 GFF6237 GFF6238 - hypothetical protein, at 29,813 to 31,132 GFF6238 GFF6239 - Catalase KatE-intracellular protease (EC 1.11.1.6), at 31,149 to 33,368 GFF6239 GFF6240 - hypothetical protein, at 33,380 to 33,529 GFF6240 GFF6241 - Transglutaminase-like domain, at 33,815 to 34,636 GFF6241 GFF6242 - ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD, at 34,769 to 37,306 GFF6242 GFF6243 - Ku domain protein, at 37,322 to 38,293 GFF6243 GFF6244 - Predicted deacylase, at 38,369 to 39,373 GFF6244 GFF6245 - no description, at 39,534 to 39,788 GFF6245 GFF6246 - Ribulose-phosphate 3-epimerase (EC 5.1.3.1), at 39,778 to 40,473 GFF6246 GFF6247 - ApaG protein, at 40,525 to 40,929 GFF6247
Locus Name Description Strand Phenotype
GFF6237 hypothetical protein + insig.
GFF6238 hypothetical protein + insig.
GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) - insig.
GFF6240 hypothetical protein - no data
GFF6241 Transglutaminase-like domain + insig.
GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD - insig.
GFF6243 Ku domain protein - insig.
GFF6244 Predicted deacylase - insig.
GFF6245 no description + insig.
GFF6246 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) - strong
GFF6247 ApaG protein + insig.

Or browse nearby genes

Or see the comparative fitness browser