Gene info for GFF6228 in Variovorax sp. SCN45

Annotation: ABC transporter, substrate-binding protein (cluster 15, trp?)
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, + strand, nucleotides 11,464 to 12,570
See nucleotide sequence around GFF6228 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6223 and GFF6224 overlap by 4 nucleotidesGFF6224 and GFF6225 are separated by 130 nucleotidesGFF6225 and GFF6226 overlap by 1 nucleotidesGFF6226 and GFF6227 are separated by 219 nucleotidesGFF6227 and GFF6228 are separated by 184 nucleotidesGFF6228 and GFF6229 overlap by 4 nucleotidesGFF6229 and GFF6230 are separated by 13 nucleotidesGFF6230 and GFF6231 are separated by 100 nucleotidesGFF6231 and GFF6232 are separated by 9 nucleotidesGFF6232 and GFF6233 are separated by 2 nucleotides GFF6223 - T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain, at 4,336 to 5,664 GFF6223 GFF6224 - T6SS component TssK (ImpJ/VasE), at 5,661 to 6,992 GFF6224 GFF6225 - ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates), at 7,123 to 8,187 GFF6225 GFF6226 - ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates), at 8,187 to 9,167 GFF6226 GFF6227 - hypothetical protein, at 9,387 to 11,279 GFF6227 GFF6228 - ABC transporter, substrate-binding protein (cluster 15, trp?), at 11,464 to 12,570 GFF6228 GFF6229 - hypothetical protein, at 12,567 to 14,549 GFF6229 GFF6230 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 14,563 to 15,540 GFF6230 GFF6231 - Amidases related to nicotinamidase, at 15,641 to 16,273 GFF6231 GFF6232 - hypothetical protein, at 16,283 to 21,721 GFF6232 GFF6233 - hypothetical protein, at 21,724 to 23,433 GFF6233
Locus Name Description Strand Phenotype
GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain - insig.
GFF6224 T6SS component TssK (ImpJ/VasE) - insig.
GFF6225 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) - insig.
GFF6226 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) - insig.
GFF6227 hypothetical protein + insig.
GFF6228 ABC transporter, substrate-binding protein (cluster 15, trp?) + no data
GFF6229 hypothetical protein + insig.
GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - insig.
GFF6231 Amidases related to nicotinamidase + insig.
GFF6232 hypothetical protein - insig.
GFF6233 hypothetical protein - insig.

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