Gene info for GFF6224 in Variovorax sp. SCN45

Annotation: T6SS component TssK (ImpJ/VasE)
Type 1: Protein-coding gene
Located on scaffold scaffold00000019, - strand, nucleotides 5,661 to 6,992
See nucleotide sequence around GFF6224 or for all of scaffold scaffold00000019

Nearby Genes

500 ntGFF6221 and GFF6222 overlap by 4 nucleotidesGFF6222 and GFF6223 overlap by 4 nucleotidesGFF6223 and GFF6224 overlap by 4 nucleotidesGFF6224 and GFF6225 are separated by 130 nucleotidesGFF6225 and GFF6226 overlap by 1 nucleotidesGFF6226 and GFF6227 are separated by 219 nucleotidesGFF6227 and GFF6228 are separated by 184 nucleotidesGFF6228 and GFF6229 overlap by 4 nucleotides GFF6221 - T6SS associated component TagF (ImpM), at 102 to 740 GFF6221 GFF6222 - T6SS component TssM (IcmF/VasK), at 737 to 4,339 GFF6222 GFF6223 - T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain, at 4,336 to 5,664 GFF6223 GFF6224 - T6SS component TssK (ImpJ/VasE), at 5,661 to 6,992 GFF6224 GFF6225 - ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates), at 7,123 to 8,187 GFF6225 GFF6226 - ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates), at 8,187 to 9,167 GFF6226 GFF6227 - hypothetical protein, at 9,387 to 11,279 GFF6227 GFF6228 - ABC transporter, substrate-binding protein (cluster 15, trp?), at 11,464 to 12,570 GFF6228 GFF6229 - hypothetical protein, at 12,567 to 14,549 GFF6229
Locus Name Description Strand Phenotype
GFF6221 T6SS associated component TagF (ImpM) - insig.
GFF6222 T6SS component TssM (IcmF/VasK) - insig.
GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain - insig.
GFF6224 T6SS component TssK (ImpJ/VasE) - insig.
GFF6225 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) - insig.
GFF6226 ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates) - insig.
GFF6227 hypothetical protein + insig.
GFF6228 ABC transporter, substrate-binding protein (cluster 15, trp?) + no data
GFF6229 hypothetical protein + insig.

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