Gene info for GFF6178 in Variovorax sp. SCN45

Annotation: Integration host factor beta subunit
Type 1: Protein-coding gene
Located on scaffold scaffold00000018, - strand, nucleotides 82,229 to 82,555
See nucleotide sequence around GFF6178 or for all of scaffold scaffold00000018

Nearby Genes

500 ntGFF6173 and GFF6174 are separated by 76 nucleotidesGFF6174 and GFF6175 are separated by 84 nucleotidesGFF6175 and GFF6176 are separated by 138 nucleotidesGFF6176 and GFF6177 overlap by 11 nucleotidesGFF6177 and GFF6178 are separated by 57 nucleotidesGFF6178 and GFF6179 are separated by 71 nucleotidesGFF6179 and GFF6180 are separated by 194 nucleotidesGFF6180 and GFF6181 are separated by 1 nucleotidesGFF6181 and GFF6182 are separated by 19 nucleotidesGFF6182 and GFF6183 are separated by 29 nucleotides GFF6173 - Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B, at 76,731 to 79,679 GFF6173 GFF6174 - Fluoride ion transporter CrcB, at 79,756 to 80,133 GFF6174 GFF6175 - hypothetical protein, at 80,218 to 80,535 GFF6175 GFF6176 - Lipopolysaccharide assembly protein LapB, at 80,674 to 81,843 GFF6176 GFF6177 - Putative transmembrane protein, at 81,833 to 82,171 GFF6177 GFF6178 - Integration host factor beta subunit, at 82,229 to 82,555 GFF6178 GFF6179 - SSU ribosomal protein S1p, at 82,627 to 84,315 GFF6179 GFF6180 - 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) / Cytidylate kinase (EC 2.7.4.25), at 84,510 to 86,522 GFF6180 GFF6181 - Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43), at 86,524 to 87,414 GFF6181 GFF6182 - Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51), at 87,434 to 88,558 GFF6182 GFF6183 - Phosphoserine aminotransferase (EC 2.6.1.52), at 88,588 to 89,718 GFF6183
Locus Name Description Strand Phenotype
GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B - insig.
GFF6174 Fluoride ion transporter CrcB - insig.
GFF6175 hypothetical protein - insig.
GFF6176 Lipopolysaccharide assembly protein LapB - no data
GFF6177 Putative transmembrane protein - insig.
GFF6178 Integration host factor beta subunit - no data
GFF6179 SSU ribosomal protein S1p - no data
GFF6180 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) / Cytidylate kinase (EC 2.7.4.25) - no data
GFF6181 Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) - no data
GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) - strong
GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) - no data

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