Gene info for GFF6043 in Variovorax sp. SCN45

Annotation: tRNA/rRNA cytosine-C5-methylase
Type 1: Protein-coding gene
Located on scaffold scaffold00000017, - strand, nucleotides 103,212 to 104,483
See nucleotide sequence around GFF6043 or for all of scaffold scaffold00000017

Nearby Genes

500 ntGFF6038 and GFF6039 are separated by 171 nucleotidesGFF6039 and GFF6040 are separated by 11 nucleotidesGFF6040 and GFF6041 are separated by 1 nucleotidesGFF6041 and GFF6042 are separated by 8 nucleotidesGFF6042 and GFF6043 are separated by 132 nucleotidesGFF6043 and GFF6044 are separated by 41 nucleotidesGFF6044 and GFF6045 are separated by 50 nucleotidesGFF6045 and GFF6046 are separated by 40 nucleotidesGFF6046 and GFF6047 are separated by 36 nucleotidesGFF6047 and GFF6048 are separated by 129 nucleotides GFF6038 - Thioredoxin reductase (EC 1.8.1.9), at 100,153 to 101,112 GFF6038 GFF6039 - LSU ribosomal protein L28p @ LSU ribosomal protein L28p, zinc-independent, at 101,284 to 101,517 GFF6039 GFF6040 - LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent, at 101,529 to 101,702 GFF6040 GFF6041 - no description, at 101,704 to 101,856 GFF6041 GFF6042 - Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1), at 101,865 to 103,079 GFF6042 GFF6043 - tRNA/rRNA cytosine-C5-methylase, at 103,212 to 104,483 GFF6043 GFF6044 - FIG00933533: hypothetical protein, at 104,525 to 106,378 GFF6044 GFF6045 - FIG00932121: hypothetical protein, at 106,429 to 106,665 GFF6045 GFF6046 - hypothetical protein, at 106,706 to 107,032 GFF6046 GFF6047 - Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2), at 107,069 to 107,665 GFF6047 GFF6048 - Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8), at 107,795 to 108,976 GFF6048
Locus Name Description Strand Phenotype
GFF6038 Thioredoxin reductase (EC 1.8.1.9) + no data
GFF6039 LSU ribosomal protein L28p @ LSU ribosomal protein L28p, zinc-independent + no data
GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent + cofit
GFF6041 no description - no data
GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) - strong
GFF6043 tRNA/rRNA cytosine-C5-methylase - insig.
GFF6044 FIG00933533: hypothetical protein - insig.
GFF6045 FIG00932121: hypothetical protein + insig.
GFF6046 hypothetical protein - insig.
GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) - cofit
GFF6048 Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) + insig.

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