Gene info for GFF5979 in Variovorax sp. SCN45

Annotation: Short-chain dehydrogenase/reductase SDR?
Type 1: Protein-coding gene
Located on scaffold scaffold00000017, + strand, nucleotides 34,045 to 34,806
See nucleotide sequence around GFF5979 or for all of scaffold scaffold00000017

Nearby Genes

500 ntGFF5974 and GFF5975 are separated by 10 nucleotidesGFF5975 and GFF5976 are separated by 226 nucleotidesGFF5976 and GFF5977 overlap by 29 nucleotidesGFF5977 and GFF5978 are separated by 56 nucleotidesGFF5978 and GFF5979 are separated by 367 nucleotidesGFF5979 and GFF5980 are separated by 1 nucleotidesGFF5980 and GFF5981 are separated by 48 nucleotidesGFF5981 and GFF5982 are separated by 91 nucleotidesGFF5982 and GFF5983 are separated by 65 nucleotidesGFF5983 and GFF5984 are separated by 125 nucleotides GFF5974 - hypothetical protein, at 30,031 to 30,378 GFF5974 GFF5975 - Two-component transcriptional response regulator, LuxR family, at 30,389 to 30,964 GFF5975 GFF5976 - Transcriptional regulator, AraC family, at 31,191 to 32,201 GFF5976 GFF5977 - Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23), at 32,173 to 33,060 GFF5977 GFF5978 - Nucleoside 2-deoxyribosyltransferase, at 33,117 to 33,677 GFF5978 GFF5979 - Short-chain dehydrogenase/reductase SDR?, at 34,045 to 34,806 GFF5979 GFF5980 - Cyanate hydratase (EC 4.2.1.104), at 34,808 to 35,251 GFF5980 GFF5981 - COGs COG3558, at 35,300 to 35,713 GFF5981 GFF5982 - Transcriptional regulator, AcrR family, at 35,805 to 36,395 GFF5982 GFF5983 - Transcriptional regulator, LysR family, at 36,461 to 37,348 GFF5983 GFF5984 - L-lactate dehydrogenase, at 37,474 to 38,631 GFF5984
Locus Name Description Strand Phenotype
GFF5974 hypothetical protein + insig.
GFF5975 Two-component transcriptional response regulator, LuxR family - insig.
GFF5976 Transcriptional regulator, AraC family + insig.
GFF5977 Lysophospholipase (EC 3.1.1.5); Monoglyceride lipase (EC 3.1.1.23) - insig.
GFF5978 Nucleoside 2-deoxyribosyltransferase - insig.
GFF5979 Short-chain dehydrogenase/reductase SDR? + no data
GFF5980 Cyanate hydratase (EC 4.2.1.104) - insig.
GFF5981 COGs COG3558 - insig.
GFF5982 Transcriptional regulator, AcrR family + insig.
GFF5983 Transcriptional regulator, LysR family + insig.
GFF5984 L-lactate dehydrogenase + strong

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