Gene info for GFF5917 in Variovorax sp. SCN45

Annotation: T6SS component TssB (ImpB/VipA)
Type 1: Protein-coding gene
Located on scaffold scaffold00000016, + strand, nucleotides 132,408 to 132,923
See nucleotide sequence around GFF5917 or for all of scaffold scaffold00000016

Nearby Genes

500 ntGFF5912 and GFF5913 are separated by 240 nucleotidesGFF5913 and GFF5914 overlap by 4 nucleotidesGFF5914 and GFF5915 are separated by 18 nucleotidesGFF5915 and GFF5916 are separated by 71 nucleotidesGFF5916 and GFF5917 are separated by 58 nucleotidesGFF5917 and GFF5918 are separated by 41 nucleotidesGFF5918 and GFF5919 are separated by 150 nucleotidesGFF5919 and GFF5920 are separated by 94 nucleotidesGFF5920 and GFF5921 are separated by 31 nucleotidesGFF5921 and GFF5922 are separated by 52 nucleotides GFF5912 - Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain, at 127,336 to 128,013 GFF5912 GFF5913 - T6SS outer membrane component TssL (ImpK/VasF) / unknown domain, at 128,254 to 129,597 GFF5913 GFF5914 - hypothetical protein, at 129,594 to 130,706 GFF5914 GFF5915 - T6SS secretion lipoprotein TssJ (VasD), at 130,725 to 131,237 GFF5915 GFF5916 - T6SS component TssA (ImpA), at 131,309 to 132,349 GFF5916 GFF5917 - T6SS component TssB (ImpB/VipA), at 132,408 to 132,923 GFF5917 GFF5918 - T6SS component TssC (ImpC/VipB), at 132,965 to 134,458 GFF5918 GFF5919 - KEGG: type VI secretion system secreted protein Hcp, at 134,609 to 135,082 GFF5919 GFF5920 - no description, at 135,177 to 136,046 GFF5920 GFF5921 - T6SS protein serine/threonine phosphatase PppA, at 136,078 to 136,881 GFF5921 GFF5922 - T6SS forkhead associated domain protein ImpI/VasC, at 136,934 to 138,613 GFF5922
Locus Name Description Strand Phenotype
GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain - insig.
GFF5913 T6SS outer membrane component TssL (ImpK/VasF) / unknown domain + insig.
GFF5914 hypothetical protein + insig.
GFF5915 T6SS secretion lipoprotein TssJ (VasD) - insig.
GFF5916 T6SS component TssA (ImpA) + insig.
GFF5917 T6SS component TssB (ImpB/VipA) + insig.
GFF5918 T6SS component TssC (ImpC/VipB) + insig.
GFF5919 KEGG: type VI secretion system secreted protein Hcp + insig.
GFF5920 no description + insig.
GFF5921 T6SS protein serine/threonine phosphatase PppA - insig.
GFF5922 T6SS forkhead associated domain protein ImpI/VasC - insig.

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