Gene info for GFF5875 in Variovorax sp. SCN45

Annotation: Probable nitrogen assimilation regulatory protein NtrX
Type 1: Protein-coding gene
Located on scaffold scaffold00000016, - strand, nucleotides 88,960 to 89,661
See nucleotide sequence around GFF5875 or for all of scaffold scaffold00000016

Nearby Genes

500 ntGFF5870 and GFF5871 are separated by 10 nucleotidesGFF5871 and GFF5872 are separated by 449 nucleotidesGFF5872 and GFF5873 are separated by 19 nucleotidesGFF5873 and GFF5874 are separated by 128 nucleotidesGFF5874 and GFF5875 are separated by 203 nucleotidesGFF5875 and GFF5876 are separated by 89 nucleotidesGFF5876 and GFF5877 are separated by 56 nucleotidesGFF5877 and GFF5878 are separated by 28 nucleotidesGFF5878 and GFF5879 are separated by 146 nucleotidesGFF5879 and GFF5880 are separated by 102 nucleotides GFF5870 - hypothetical protein, at 82,880 to 83,734 GFF5870 GFF5871 - hypothetical protein, at 83,745 to 86,036 GFF5871 GFF5872 - Inner membrane protein YbhQ, at 86,486 to 87,520 GFF5872 GFF5873 - no description, at 87,540 to 87,725 GFF5873 GFF5874 - hypothetical protein, at 87,854 to 88,756 GFF5874 GFF5875 - Probable nitrogen assimilation regulatory protein NtrX, at 88,960 to 89,661 GFF5875 GFF5876 - Nitrogen regulation protein NtrY (EC 2.7.3.-), at 89,751 to 92,021 GFF5876 GFF5877 - Probable proline rich signal peptide protein, at 92,078 to 92,671 GFF5877 GFF5878 - 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176), at 92,700 to 94,001 GFF5878 GFF5879 - LemA, at 94,148 to 94,738 GFF5879 GFF5880 - DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6), at 94,841 to 99,076 GFF5880
Locus Name Description Strand Phenotype
GFF5870 hypothetical protein + cofit
GFF5871 hypothetical protein + cofit
GFF5872 Inner membrane protein YbhQ - insig.
GFF5873 no description - no data
GFF5874 hypothetical protein - insig.
GFF5875 Probable nitrogen assimilation regulatory protein NtrX - no data
GFF5876 Nitrogen regulation protein NtrY (EC 2.7.3.-) - strong
GFF5877 Probable proline rich signal peptide protein - strong
GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) - insig.
GFF5879 LemA - insig.
GFF5880 DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6) - no data

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