Gene info for GFF5856 in Variovorax sp. SCN45

Annotation: Outer membrane receptor proteins, likely involved in siderophore uptake
Type 1: Protein-coding gene
Located on scaffold scaffold00000016, - strand, nucleotides 55,882 to 58,413
See nucleotide sequence around GFF5856 or for all of scaffold scaffold00000016

Nearby Genes

500 ntGFF5851 and GFF5852 are separated by 7 nucleotidesGFF5852 and GFF5853 overlap by 14 nucleotidesGFF5853 and GFF5854 overlap by 4 nucleotidesGFF5854 and GFF5855 are separated by 5 nucleotidesGFF5855 and GFF5856 are separated by 321 nucleotidesGFF5856 and GFF5857 are separated by 109 nucleotidesGFF5857 and GFF5858 overlap by 4 nucleotidesGFF5858 and GFF5859 are separated by 119 nucleotidesGFF5859 and GFF5860 are separated by 14 nucleotidesGFF5860 and GFF5861 are separated by 137 nucleotides GFF5851 - TPR repeat, at 29,647 to 30,915 GFF5851 GFF5852 - Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC, at 30,923 to 32,179 GFF5852 GFF5853 - Type I secretion system ATPase, LssB family LapB, at 32,166 to 34,292 GFF5853 GFF5854 - Type I secretion system, outer membrane component LapE, at 34,289 to 35,713 GFF5854 GFF5855 - T1SS secreted agglutinin RTX, at 35,719 to 55,560 GFF5855 GFF5856 - Outer membrane receptor proteins, likely involved in siderophore uptake, at 55,882 to 58,413 GFF5856 GFF5857 - Fe2+-dicitrate sensor, membrane component, at 58,523 to 59,509 GFF5857 GFF5858 - heme uptake regulator, at 59,506 to 60,033 GFF5858 GFF5859 - KEGG: nickel transport system substrate-binding protein, at 60,153 to 60,905 GFF5859 GFF5860 - no description, at 60,920 to 63,355 GFF5860 GFF5861 - Fe2+-dicitrate sensor, membrane component, at 63,493 to 64,506 GFF5861
Locus Name Description Strand Phenotype
GFF5851 TPR repeat - insig.
GFF5852 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC - insig.
GFF5853 Type I secretion system ATPase, LssB family LapB - insig.
GFF5854 Type I secretion system, outer membrane component LapE - insig.
GFF5855 T1SS secreted agglutinin RTX - insig.
GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake - insig.
GFF5857 Fe2+-dicitrate sensor, membrane component - insig.
GFF5858 heme uptake regulator - insig.
GFF5859 KEGG: nickel transport system substrate-binding protein - insig.
GFF5860 no description - insig.
GFF5861 Fe2+-dicitrate sensor, membrane component - no data

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