Gene info for GFF5852 in Variovorax sp. SCN45

Annotation: Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC
Type 1: Protein-coding gene
Located on scaffold scaffold00000016, - strand, nucleotides 30,923 to 32,179
See nucleotide sequence around GFF5852 or for all of scaffold scaffold00000016

Nearby Genes

500 ntGFF5847 and GFF5848 overlap by 1 nucleotidesGFF5848 and GFF5849 are separated by 13 nucleotidesGFF5849 and GFF5850 are separated by 147 nucleotidesGFF5850 and GFF5851 are separated by 21 nucleotidesGFF5851 and GFF5852 are separated by 7 nucleotidesGFF5852 and GFF5853 overlap by 14 nucleotidesGFF5853 and GFF5854 overlap by 4 nucleotidesGFF5854 and GFF5855 are separated by 5 nucleotidesGFF5855 and GFF5856 are separated by 321 nucleotidesGFF5856 and GFF5857 are separated by 109 nucleotides GFF5847 - putative membrane protein, at 24,091 to 26,745 GFF5847 GFF5848 - Flagellar motor protein, at 26,745 to 27,404 GFF5848 GFF5849 - FIG01210206: hypothetical protein, at 27,418 to 28,077 GFF5849 GFF5850 - Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68), at 28,225 to 29,625 GFF5850 GFF5851 - TPR repeat, at 29,647 to 30,915 GFF5851 GFF5852 - Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC, at 30,923 to 32,179 GFF5852 GFF5853 - Type I secretion system ATPase, LssB family LapB, at 32,166 to 34,292 GFF5853 GFF5854 - Type I secretion system, outer membrane component LapE, at 34,289 to 35,713 GFF5854 GFF5855 - T1SS secreted agglutinin RTX, at 35,719 to 55,560 GFF5855 GFF5856 - Outer membrane receptor proteins, likely involved in siderophore uptake, at 55,882 to 58,413 GFF5856 GFF5857 - Fe2+-dicitrate sensor, membrane component, at 58,523 to 59,509 GFF5857
Locus Name Description Strand Phenotype
GFF5847 putative membrane protein + insig.
GFF5848 Flagellar motor protein + insig.
GFF5849 FIG01210206: hypothetical protein + insig.
GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) + insig.
GFF5851 TPR repeat - insig.
GFF5852 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC - insig.
GFF5853 Type I secretion system ATPase, LssB family LapB - insig.
GFF5854 Type I secretion system, outer membrane component LapE - insig.
GFF5855 T1SS secreted agglutinin RTX - insig.
GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake - insig.
GFF5857 Fe2+-dicitrate sensor, membrane component - insig.

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