Gene info for GFF5606 in Variovorax sp. SCN45

Annotation: Xylose-responsive transcription regulator, ROK family
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 224,876 to 226,039
See nucleotide sequence around GFF5606 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5601 and GFF5602 are separated by 132 nucleotidesGFF5602 and GFF5603 are separated by 186 nucleotidesGFF5603 and GFF5604 are separated by 116 nucleotidesGFF5604 and GFF5605 are separated by 1 nucleotidesGFF5605 and GFF5606 are separated by 1 nucleotidesGFF5606 and GFF5607 are separated by 4 nucleotidesGFF5607 and GFF5608 are separated by 136 nucleotidesGFF5608 and GFF5609 are separated by 9 nucleotidesGFF5609 and GFF5610 are separated by 192 nucleotidesGFF5610 and GFF5611 are separated by 82 nucleotides GFF5601 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 220,234 to 220,920 GFF5601 GFF5602 - FIG00348944: hypothetical protein, at 221,053 to 221,559 GFF5602 GFF5603 - D-xylose ABC transporter, substrate-binding protein XylF, at 221,746 to 222,768 GFF5603 GFF5604 - D-xylose ABC transporter, permease protein XylH, at 222,885 to 224,075 GFF5604 GFF5605 - D-xylose ABC transporter, ATP-binding protein XylG, at 224,077 to 224,874 GFF5605 GFF5606 - Xylose-responsive transcription regulator, ROK family, at 224,876 to 226,039 GFF5606 GFF5607 - Sigma-54 activated regulatory protein, at 226,044 to 227,324 GFF5607 GFF5608 - Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8), at 227,461 to 229,575 GFF5608 GFF5609 - Transcriptional regulator, LuxR family, at 229,585 to 230,565 GFF5609 GFF5610 - hypothetical protein, at 230,758 to 232,878 GFF5610 GFF5611 - BUG/TctC family periplasmic protein, at 232,961 to 233,935 GFF5611
Locus Name Description Strand Phenotype
GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold + insig.
GFF5602 FIG00348944: hypothetical protein + insig.
GFF5603 D-xylose ABC transporter, substrate-binding protein XylF + cofit
GFF5604 D-xylose ABC transporter, permease protein XylH + strong
GFF5605 D-xylose ABC transporter, ATP-binding protein XylG + strong
GFF5606 Xylose-responsive transcription regulator, ROK family + sig.
GFF5607 Sigma-54 activated regulatory protein - insig.
GFF5608 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) + insig.
GFF5609 Transcriptional regulator, LuxR family - insig.
GFF5610 hypothetical protein + insig.
GFF5611 BUG/TctC family periplasmic protein - insig.

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