Gene info for GFF5603 in Variovorax sp. SCN45

Annotation: D-xylose ABC transporter, substrate-binding protein XylF
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 221,746 to 222,768
See nucleotide sequence around GFF5603 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5598 and GFF5599 overlap by 4 nucleotidesGFF5599 and GFF5600 overlap by 4 nucleotidesGFF5600 and GFF5601 are separated by 9 nucleotidesGFF5601 and GFF5602 are separated by 132 nucleotidesGFF5602 and GFF5603 are separated by 186 nucleotidesGFF5603 and GFF5604 are separated by 116 nucleotidesGFF5604 and GFF5605 are separated by 1 nucleotidesGFF5605 and GFF5606 are separated by 1 nucleotidesGFF5606 and GFF5607 are separated by 4 nucleotidesGFF5607 and GFF5608 are separated by 136 nucleotides GFF5598 - putative phospholipase D family protein, at 218,379 to 219,659 GFF5598 GFF5599 - hypothetical protein, at 219,656 to 220,087 GFF5599 GFF5600 - no description, at 220,084 to 220,224 GFF5600 GFF5601 - Predicted hydrolase of the alpha/beta-hydrolase fold, at 220,234 to 220,920 GFF5601 GFF5602 - FIG00348944: hypothetical protein, at 221,053 to 221,559 GFF5602 GFF5603 - D-xylose ABC transporter, substrate-binding protein XylF, at 221,746 to 222,768 GFF5603 GFF5604 - D-xylose ABC transporter, permease protein XylH, at 222,885 to 224,075 GFF5604 GFF5605 - D-xylose ABC transporter, ATP-binding protein XylG, at 224,077 to 224,874 GFF5605 GFF5606 - Xylose-responsive transcription regulator, ROK family, at 224,876 to 226,039 GFF5606 GFF5607 - Sigma-54 activated regulatory protein, at 226,044 to 227,324 GFF5607 GFF5608 - Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8), at 227,461 to 229,575 GFF5608
Locus Name Description Strand Phenotype
GFF5598 putative phospholipase D family protein + insig.
GFF5599 hypothetical protein - insig.
GFF5600 no description - insig.
GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold + insig.
GFF5602 FIG00348944: hypothetical protein + insig.
GFF5603 D-xylose ABC transporter, substrate-binding protein XylF + cofit
GFF5604 D-xylose ABC transporter, permease protein XylH + strong
GFF5605 D-xylose ABC transporter, ATP-binding protein XylG + strong
GFF5606 Xylose-responsive transcription regulator, ROK family + sig.
GFF5607 Sigma-54 activated regulatory protein - insig.
GFF5608 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) + insig.

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