Gene info for GFF560 in Variovorax sp. SCN45

Annotation: Serine hydroxymethyltransferase (EC 2.1.2.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, + strand, nucleotides 606,129 to 607,373
See nucleotide sequence around GFF560 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF555 and GFF556 are separated by 81 nucleotidesGFF556 and GFF557 are separated by 70 nucleotidesGFF557 and GFF558 are separated by 203 nucleotidesGFF558 and GFF559 are separated by 727 nucleotidesGFF559 and GFF560 are separated by 197 nucleotidesGFF560 and GFF561 are separated by 24 nucleotidesGFF561 and GFF562 are separated by 36 nucleotidesGFF562 and GFF563 are separated by 20 nucleotidesGFF563 and GFF564 are separated by 20 nucleotidesGFF564 and GFF565 overlap by 4 nucleotides GFF555 - Putative inner membrane protein, at 595,986 to 596,789 GFF555 GFF556 - no description, at 596,871 to 597,467 GFF556 GFF557 - Plectin 1, at 597,538 to 600,381 GFF557 GFF558 - hypothetical protein, at 600,585 to 604,352 GFF558 GFF559 - FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 605,080 to 605,931 GFF559 GFF560 - Serine hydroxymethyltransferase (EC 2.1.2.1), at 606,129 to 607,373 GFF560 GFF561 - Ribonucleotide reductase transcriptional regulator NrdR, at 607,398 to 607,841 GFF561 GFF562 - Type IV pilus biogenesis protein PilE, at 607,878 to 608,339 GFF562 GFF563 - Type IV fimbrial biogenesis protein PilY1, at 608,360 to 611,755 GFF563 GFF564 - hypothetical protein, at 611,776 to 612,459 GFF564 GFF565 - Prepilin-type cleavage/methylation-like protein, at 612,456 to 613,271 GFF565
Locus Name Description Strand Phenotype
GFF555 Putative inner membrane protein + insig.
GFF556 no description + insig.
GFF557 Plectin 1 - insig.
GFF558 hypothetical protein - insig.
GFF559 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + cofit
GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1) + no data
GFF561 Ribonucleotide reductase transcriptional regulator NrdR + strong
GFF562 Type IV pilus biogenesis protein PilE - insig.
GFF563 Type IV fimbrial biogenesis protein PilY1 - insig.
GFF564 hypothetical protein - insig.
GFF565 Prepilin-type cleavage/methylation-like protein - insig.

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