Gene info for GFF5573 in Variovorax sp. SCN45

Annotation: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 193,399 to 194,373
See nucleotide sequence around GFF5573 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5568 and GFF5569 are separated by 132 nucleotidesGFF5569 and GFF5570 are separated by 142 nucleotidesGFF5570 and GFF5571 are separated by 92 nucleotidesGFF5571 and GFF5572 are separated by 218 nucleotidesGFF5572 and GFF5573 are separated by 110 nucleotidesGFF5573 and GFF5574 are separated by 30 nucleotidesGFF5574 and GFF5575 overlap by 4 nucleotidesGFF5575 and GFF5576 are separated by 5 nucleotidesGFF5576 and GFF5577 are separated by 4 nucleotidesGFF5577 and GFF5578 overlap by 4 nucleotides GFF5568 - SSU ribosomal protein S11p (S14e), at 189,636 to 190,040 GFF5568 GFF5569 - SSU ribosomal protein S4p (S9e) @ SSU ribosomal protein S4p (S9e), zinc-independent, at 190,173 to 190,796 GFF5569 GFF5570 - DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), at 190,939 to 191,928 GFF5570 GFF5571 - LSU ribosomal protein L17p, at 192,021 to 192,419 GFF5571 GFF5572 - FIG00984604: hypothetical protein, at 192,638 to 193,288 GFF5572 GFF5573 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 193,399 to 194,373 GFF5573 GFF5574 - RidA/YER057c/UK114 superfamily protein, at 194,404 to 194,805 GFF5574 GFF5575 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 194,802 to 196,424 GFF5575 GFF5576 - Acyl-CoA dehydrogenase, at 196,430 to 197,623 GFF5576 GFF5577 - Enoyl-CoA hydratase (EC 4.2.1.17), at 197,628 to 198,482 GFF5577 GFF5578 - Transcriptional regulator, MarR family, at 198,479 to 198,958 GFF5578
Locus Name Description Strand Phenotype
GFF5568 SSU ribosomal protein S11p (S14e) + no data
GFF5569 SSU ribosomal protein S4p (S9e) @ SSU ribosomal protein S4p (S9e), zinc-independent + no data
GFF5570 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) + no data
GFF5571 LSU ribosomal protein L17p + no data
GFF5572 FIG00984604: hypothetical protein - insig.
GFF5573 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain + insig.
GFF5574 RidA/YER057c/UK114 superfamily protein - no data
GFF5575 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - insig.
GFF5576 Acyl-CoA dehydrogenase - insig.
GFF5577 Enoyl-CoA hydratase (EC 4.2.1.17) - insig.
GFF5578 Transcriptional regulator, MarR family - no data

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