Gene info for GFF5550 in Variovorax sp. SCN45

Annotation: DNA protection during starvation protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 179,335 to 179,910
See nucleotide sequence around GFF5550 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5545 and GFF5546 are separated by 45 nucleotidesGFF5546 and GFF5547 overlap by 4 nucleotidesGFF5547 and GFF5548 are separated by 14 nucleotidesGFF5548 and GFF5549 are separated by 301 nucleotidesGFF5549 and GFF5550 are separated by 140 nucleotidesGFF5550 and GFF5551 are separated by 74 nucleotidesGFF5551 and GFF5552 are separated by 2 nucleotidesGFF5552 and GFF5553 are separated by 2 nucleotidesGFF5553 and GFF5554 are separated by 12 nucleotidesGFF5554 and GFF5555 are separated by 215 nucleotides GFF5545 - Pyrrolidone-carboxylate peptidase (EC 3.4.19.3), at 173,088 to 173,771 GFF5545 GFF5546 - Lactam utilization protein LamB, at 173,817 to 174,584 GFF5546 GFF5547 - Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54), at 174,581 to 176,173 GFF5547 GFF5548 - Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains, at 176,188 to 177,927 GFF5548 GFF5549 - Hydrogen peroxide-inducible genes activator => OxyR, at 178,229 to 179,194 GFF5549 GFF5550 - DNA protection during starvation protein, at 179,335 to 179,910 GFF5550 GFF5551 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 179,985 to 180,845 GFF5551 GFF5552 - MaoC domain protein dehydratase, at 180,848 to 181,333 GFF5552 GFF5553 - Pyrroline-5-carboxylate reductase (EC 1.5.1.2), at 181,336 to 182,193 GFF5553 GFF5554 - FIG00347521: hypothetical protein, at 182,206 to 183,366 GFF5554 GFF5555 - LSU ribosomal protein L14p (L23e), at 183,582 to 183,950 GFF5555
Locus Name Description Strand Phenotype
GFF5545 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) + insig.
GFF5546 Lactam utilization protein LamB + insig.
GFF5547 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) + insig.
GFF5548 Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains + cofit
GFF5549 Hydrogen peroxide-inducible genes activator => OxyR + insig.
GFF5550 DNA protection during starvation protein + insig.
GFF5551 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39) + no data
GFF5552 MaoC domain protein dehydratase + insig.
GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) - no data
GFF5554 FIG00347521: hypothetical protein - insig.
GFF5555 LSU ribosomal protein L14p (L23e) + no data

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