Gene info for GFF5548 in Variovorax sp. SCN45

Annotation: Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 176,188 to 177,927
See nucleotide sequence around GFF5548 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5543 and GFF5544 are separated by 2 nucleotidesGFF5544 and GFF5545 are separated by 10 nucleotidesGFF5545 and GFF5546 are separated by 45 nucleotidesGFF5546 and GFF5547 overlap by 4 nucleotidesGFF5547 and GFF5548 are separated by 14 nucleotidesGFF5548 and GFF5549 are separated by 301 nucleotidesGFF5549 and GFF5550 are separated by 140 nucleotidesGFF5550 and GFF5551 are separated by 74 nucleotidesGFF5551 and GFF5552 are separated by 2 nucleotidesGFF5552 and GFF5553 are separated by 2 nucleotides GFF5543 - FIG015373: Membrane protein, at 171,381 to 172,118 GFF5543 GFF5544 - FIG001614: Membrane protein, at 172,121 to 173,077 GFF5544 GFF5545 - Pyrrolidone-carboxylate peptidase (EC 3.4.19.3), at 173,088 to 173,771 GFF5545 GFF5546 - Lactam utilization protein LamB, at 173,817 to 174,584 GFF5546 GFF5547 - Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54), at 174,581 to 176,173 GFF5547 GFF5548 - Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains, at 176,188 to 177,927 GFF5548 GFF5549 - Hydrogen peroxide-inducible genes activator => OxyR, at 178,229 to 179,194 GFF5549 GFF5550 - DNA protection during starvation protein, at 179,335 to 179,910 GFF5550 GFF5551 - 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39), at 179,985 to 180,845 GFF5551 GFF5552 - MaoC domain protein dehydratase, at 180,848 to 181,333 GFF5552 GFF5553 - Pyrroline-5-carboxylate reductase (EC 1.5.1.2), at 181,336 to 182,193 GFF5553
Locus Name Description Strand Phenotype
GFF5543 FIG015373: Membrane protein + insig.
GFF5544 FIG001614: Membrane protein + insig.
GFF5545 Pyrrolidone-carboxylate peptidase (EC 3.4.19.3) + insig.
GFF5546 Lactam utilization protein LamB + insig.
GFF5547 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) / Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) + insig.
GFF5548 Urea carboxylase (EC 6.3.4.6) without Allophanate hydrolase 2 domains + cofit
GFF5549 Hydrogen peroxide-inducible genes activator => OxyR + insig.
GFF5550 DNA protection during starvation protein + insig.
GFF5551 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.39) + no data
GFF5552 MaoC domain protein dehydratase + insig.
GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) - no data

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