Gene info for GFF5520 in Variovorax sp. SCN45

Annotation: tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 150,958 to 151,689
See nucleotide sequence around GFF5520 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5515 and GFF5516 are separated by 159 nucleotidesGFF5516 and GFF5517 are separated by 37 nucleotidesGFF5517 and GFF5518 are separated by 39 nucleotidesGFF5518 and GFF5519 are separated by 56 nucleotidesGFF5519 and GFF5520 are separated by 111 nucleotidesGFF5520 and GFF5521 overlap by 4 nucleotidesGFF5521 and GFF5522 overlap by 4 nucleotidesGFF5522 and GFF5523 are separated by 55 nucleotidesGFF5523 and GFF5524 are separated by 6 nucleotidesGFF5524 and GFF5525 are separated by 142 nucleotides GFF5515 - Lysophospholipase (EC 3.1.1.5), at 145,558 to 147,138 GFF5515 GFF5516 - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4), at 147,298 to 148,740 GFF5516 GFF5517 - Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63), at 148,778 to 149,365 GFF5517 GFF5518 - Nudix hydrolase family protein KPN_02621, at 149,405 to 149,998 GFF5518 GFF5519 - Transcriptional regulator, at 150,055 to 150,846 GFF5519 GFF5520 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 150,958 to 151,689 GFF5520 GFF5521 - Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128), at 151,686 to 152,228 GFF5521 GFF5522 - Uracil-DNA glycosylase, family 4 (EC 3.2.2.27), at 152,225 to 153,067 GFF5522 GFF5523 - Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23), at 153,123 to 153,947 GFF5523 GFF5524 - Predicted transcriptional regulator, at 153,954 to 154,688 GFF5524 GFF5525 - FIG00933173: hypothetical protein, at 154,831 to 155,685 GFF5525
Locus Name Description Strand Phenotype
GFF5515 Lysophospholipase (EC 3.1.1.5) - insig.
GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) - insig.
GFF5517 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) - insig.
GFF5518 Nudix hydrolase family protein KPN_02621 - insig.
GFF5519 Transcriptional regulator + insig.
GFF5520 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB + no data
GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) + cofit
GFF5522 Uracil-DNA glycosylase, family 4 (EC 3.2.2.27) + no data
GFF5523 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) + insig.
GFF5524 Predicted transcriptional regulator - insig.
GFF5525 FIG00933173: hypothetical protein + insig.

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