Gene info for GFF5478 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 108,181 to 108,813
See nucleotide sequence around GFF5478 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5473 and GFF5474 are separated by 4 nucleotidesGFF5474 and GFF5475 are separated by 53 nucleotidesGFF5475 and GFF5476 are separated by 42 nucleotidesGFF5476 and GFF5477 are separated by 87 nucleotidesGFF5477 and GFF5478 are separated by 229 nucleotidesGFF5478 and GFF5479 are separated by 60 nucleotidesGFF5479 and GFF5480 overlap by 4 nucleotidesGFF5480 and GFF5481 are separated by 97 nucleotidesGFF5481 and GFF5482 are separated by 101 nucleotidesGFF5482 and GFF5483 are separated by 178 nucleotides GFF5473 - hypothetical protein, at 101,940 to 104,396 GFF5473 GFF5474 - no description, at 104,401 to 104,607 GFF5474 GFF5475 - Uncharacterized MFS-type transporter, at 104,661 to 106,286 GFF5475 GFF5476 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 106,329 to 107,099 GFF5476 GFF5477 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 107,187 to 107,951 GFF5477 GFF5478 - hypothetical protein, at 108,181 to 108,813 GFF5478 GFF5479 - hypothetical protein, at 108,874 to 109,416 GFF5479 GFF5480 - no description, at 109,413 to 109,823 GFF5480 GFF5481 - hypothetical protein, at 109,921 to 110,280 GFF5481 GFF5482 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 110,382 to 110,858 GFF5482 GFF5483 - Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits, at 111,037 to 114,648 GFF5483
Locus Name Description Strand Phenotype
GFF5473 hypothetical protein - insig.
GFF5474 no description - insig.
GFF5475 Uncharacterized MFS-type transporter - insig.
GFF5476 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5477 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5478 hypothetical protein + insig.
GFF5479 hypothetical protein + insig.
GFF5480 no description + insig.
GFF5481 hypothetical protein + insig.
GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system - insig.
GFF5483 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits + cofit

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