Gene info for GFF5478 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Tricarboxylate transport protein TctC
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, - strand, nucleotides 2,479,958 to 2,480,926
See nucleotide sequence around GFF5478 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF5473 and GFF5474 are separated by 4 nucleotidesGFF5474 and GFF5475 are separated by 42 nucleotidesGFF5475 and GFF5476 overlap by 4 nucleotidesGFF5476 and GFF5477 are separated by 15 nucleotidesGFF5477 and GFF5478 are separated by 15 nucleotidesGFF5478 and GFF5479 overlap by 4 nucleotidesGFF5479 and GFF5480 are separated by 56 nucleotidesGFF5480 and GFF5481 are separated by 2 nucleotidesGFF5481 and GFF5482 are separated by 18 nucleotidesGFF5482 and GFF5483 are separated by 148 nucleotides GFF5473 - Transcriptional regulator, MarR family, at 2,476,031 to 2,476,468 GFF5473 GFF5474 - Epoxyqueuosine (oQ) reductase QueG, at 2,476,473 to 2,477,564 GFF5474 GFF5475 - TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 2,477,607 to 2,478,143 GFF5475 GFF5476 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 2,478,140 to 2,479,597 GFF5476 GFF5477 - Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-), at 2,479,613 to 2,479,942 GFF5477 GFF5478 - Tricarboxylate transport protein TctC, at 2,479,958 to 2,480,926 GFF5478 GFF5479 - Isochorismate pyruvate-lyase (EC 4.-.-.-), at 2,480,923 to 2,481,255 GFF5479 GFF5480 - Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA, at 2,481,312 to 2,481,800 GFF5480 GFF5481 - Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB, at 2,481,803 to 2,483,071 GFF5481 GFF5482 - Ferredoxin reductase, at 2,483,090 to 2,484,076 GFF5482 GFF5483 - LysR-family transcriptional regulator, at 2,484,225 to 2,485,145 GFF5483
Locus Name Description Strand Phenotype
GFF5473 Transcriptional regulator, MarR family + insig.
GFF5474 Epoxyqueuosine (oQ) reductase QueG - insig.
GFF5475 TsaE protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA + no data
GFF5476 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) + insig.
GFF5477 Probable ferredoxin subunit of a ring-hydroxylating dioxygenase oxidoreductase protein (EC 1.-.-.-) - insig.
GFF5478 Tricarboxylate transport protein TctC - insig.
GFF5479 Isochorismate pyruvate-lyase (EC 4.-.-.-) - no data
GFF5480 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA - insig.
GFF5481 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB - insig.
GFF5482 Ferredoxin reductase - insig.
GFF5483 LysR-family transcriptional regulator + insig.

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