Gene info for GFF5401 in Variovorax sp. SCN45

Annotation: 2-keto-3-deoxy-L-fuconate dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, + strand, nucleotides 25,175 to 25,945
See nucleotide sequence around GFF5401 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5396 and GFF5397 are separated by 16 nucleotidesGFF5397 and GFF5398 are separated by 47 nucleotidesGFF5398 and GFF5399 are separated by 14 nucleotidesGFF5399 and GFF5400 are separated by 11 nucleotidesGFF5400 and GFF5401 are separated by 230 nucleotidesGFF5401 and GFF5402 are separated by 13 nucleotidesGFF5402 and GFF5403 are separated by 64 nucleotidesGFF5403 and GFF5404 are separated by 18 nucleotidesGFF5404 and GFF5405 are separated by 204 nucleotidesGFF5405 and GFF5406 are separated by 10 nucleotides GFF5396 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,293 to 21,949 GFF5396 GFF5397 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,966 to 22,649 GFF5397 GFF5398 - L-fuconate dehydratase (EC 4.2.1.68), type 2, at 22,697 to 23,929 GFF5398 GFF5399 - Altronate dehydratase (EC 4.2.1.7), at 23,944 to 24,258 GFF5399 GFF5400 - Demethylmenaquinone methyltransferase-like protein, at 24,270 to 24,944 GFF5400 GFF5401 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 25,175 to 25,945 GFF5401 GFF5402 - Transcriptional regulator, IclR family, at 25,959 to 26,813 GFF5402 GFF5403 - no description, at 26,878 to 27,594 GFF5403 GFF5404 - N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38), at 27,613 to 28,536 GFF5404 GFF5405 - Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5), at 28,741 to 29,907 GFF5405 GFF5406 - Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5), at 29,918 to 30,811 GFF5406
Locus Name Description Strand Phenotype
GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5398 L-fuconate dehydratase (EC 4.2.1.68), type 2 - insig.
GFF5399 Altronate dehydratase (EC 4.2.1.7) - insig.
GFF5400 Demethylmenaquinone methyltransferase-like protein - insig.
GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase + insig.
GFF5402 Transcriptional regulator, IclR family + cofit
GFF5403 no description + insig.
GFF5404 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) - cofit
GFF5405 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) + no data
GFF5406 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) + no data

Or browse nearby genes

Or see the comparative fitness browser