Gene info for GFF5397 in Variovorax sp. SCN45

Annotation: ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, - strand, nucleotides 21,966 to 22,649
See nucleotide sequence around GFF5397 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5392 and GFF5393 are separated by 1 nucleotidesGFF5393 and GFF5394 are separated by 5 nucleotidesGFF5394 and GFF5395 are separated by 32 nucleotidesGFF5395 and GFF5396 overlap by 17 nucleotidesGFF5396 and GFF5397 are separated by 16 nucleotidesGFF5397 and GFF5398 are separated by 47 nucleotidesGFF5398 and GFF5399 are separated by 14 nucleotidesGFF5399 and GFF5400 are separated by 11 nucleotidesGFF5400 and GFF5401 are separated by 230 nucleotidesGFF5401 and GFF5402 are separated by 13 nucleotides GFF5392 - no description, at 18,173 to 18,604 GFF5392 GFF5393 - mandelate racemase/muconate lactonizing enzyme family protein, at 18,606 to 19,715 GFF5393 GFF5394 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 19,721 to 20,548 GFF5394 GFF5395 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 20,581 to 21,309 GFF5395 GFF5396 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,293 to 21,949 GFF5396 GFF5397 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,966 to 22,649 GFF5397 GFF5398 - L-fuconate dehydratase (EC 4.2.1.68), type 2, at 22,697 to 23,929 GFF5398 GFF5399 - Altronate dehydratase (EC 4.2.1.7), at 23,944 to 24,258 GFF5399 GFF5400 - Demethylmenaquinone methyltransferase-like protein, at 24,270 to 24,944 GFF5400 GFF5401 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 25,175 to 25,945 GFF5401 GFF5402 - Transcriptional regulator, IclR family, at 25,959 to 26,813 GFF5402
Locus Name Description Strand Phenotype
GFF5392 no description + insig.
GFF5393 mandelate racemase/muconate lactonizing enzyme family protein - insig.
GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5395 Glutamine ABC transporter, ATP-binding protein GlnQ - insig.
GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5398 L-fuconate dehydratase (EC 4.2.1.68), type 2 - insig.
GFF5399 Altronate dehydratase (EC 4.2.1.7) - insig.
GFF5400 Demethylmenaquinone methyltransferase-like protein - insig.
GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase + insig.
GFF5402 Transcriptional regulator, IclR family + cofit

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