Gene info for GFF5393 in Variovorax sp. SCN45

Annotation: mandelate racemase/muconate lactonizing enzyme family protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000014, - strand, nucleotides 18,606 to 19,715
See nucleotide sequence around GFF5393 or for all of scaffold scaffold00000014

Nearby Genes

500 ntGFF5388 and GFF5389 are separated by 66 nucleotidesGFF5389 and GFF5390 are separated by 145 nucleotidesGFF5390 and GFF5391 are separated by 45 nucleotidesGFF5391 and GFF5392 overlap by 20 nucleotidesGFF5392 and GFF5393 are separated by 1 nucleotidesGFF5393 and GFF5394 are separated by 5 nucleotidesGFF5394 and GFF5395 are separated by 32 nucleotidesGFF5395 and GFF5396 overlap by 17 nucleotidesGFF5396 and GFF5397 are separated by 16 nucleotidesGFF5397 and GFF5398 are separated by 47 nucleotides GFF5388 - Two-component response regulatory protein BP2547, at 15,207 to 15,881 GFF5388 GFF5389 - Transcriptional regulator, MarR family, at 15,948 to 16,433 GFF5389 GFF5390 - RecA protein, at 16,579 to 17,685 GFF5390 GFF5391 - Regulatory protein RecX, at 17,731 to 18,192 GFF5391 GFF5392 - no description, at 18,173 to 18,604 GFF5392 GFF5393 - mandelate racemase/muconate lactonizing enzyme family protein, at 18,606 to 19,715 GFF5393 GFF5394 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 19,721 to 20,548 GFF5394 GFF5395 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 20,581 to 21,309 GFF5395 GFF5396 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,293 to 21,949 GFF5396 GFF5397 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 21,966 to 22,649 GFF5397 GFF5398 - L-fuconate dehydratase (EC 4.2.1.68), type 2, at 22,697 to 23,929 GFF5398
Locus Name Description Strand Phenotype
GFF5388 Two-component response regulatory protein BP2547 - insig.
GFF5389 Transcriptional regulator, MarR family - no data
GFF5390 RecA protein + strong
GFF5391 Regulatory protein RecX + no data
GFF5392 no description + insig.
GFF5393 mandelate racemase/muconate lactonizing enzyme family protein - insig.
GFF5394 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5395 Glutamine ABC transporter, ATP-binding protein GlnQ - insig.
GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5397 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) - insig.
GFF5398 L-fuconate dehydratase (EC 4.2.1.68), type 2 - insig.

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