Gene info for GFF5352 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: TRAP transporter solute receptor, unknown substrate 5
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, + strand, nucleotides 2,355,318 to 2,356,292
See nucleotide sequence around GFF5352 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF5347 and GFF5348 are separated by 45 nucleotidesGFF5348 and GFF5349 overlap by 11 nucleotidesGFF5349 and GFF5350 are separated by 3 nucleotidesGFF5350 and GFF5351 are separated by 5 nucleotidesGFF5351 and GFF5352 are separated by 228 nucleotidesGFF5352 and GFF5353 are separated by 63 nucleotidesGFF5353 and GFF5354 overlap by 8 nucleotidesGFF5354 and GFF5355 are separated by 78 nucleotidesGFF5355 and GFF5356 are separated by 26 nucleotidesGFF5356 and GFF5357 overlap by 14 nucleotides GFF5347 - Integration host factor beta subunit, at 2,349,192 to 2,349,512 GFF5347 GFF5348 - Probable transmembrane protein, at 2,349,558 to 2,349,869 GFF5348 GFF5349 - Heat shock (predicted periplasmic) protein YciM, precursor, at 2,349,859 to 2,351,004 GFF5349 GFF5350 - 5-oxoprolinase (EC 3.5.2.9), at 2,351,008 to 2,354,595 GFF5350 GFF5351 - Predicted transcription regulator, contains HTH domain (MarR family), at 2,354,601 to 2,355,089 GFF5351 GFF5352 - TRAP transporter solute receptor, unknown substrate 5, at 2,355,318 to 2,356,292 GFF5352 GFF5353 - TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5, at 2,356,356 to 2,356,859 GFF5353 GFF5354 - TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5, at 2,356,852 to 2,358,147 GFF5354 GFF5355 - DNA recombination-dependent growth factor C, at 2,358,226 to 2,359,218 GFF5355 GFF5356 - Protein crcB homolog, at 2,359,245 to 2,359,628 GFF5356 GFF5357 - Transcriptional regulator, AraC family, at 2,359,615 to 2,360,526 GFF5357
Locus Name Description Strand Phenotype
GFF5347 Integration host factor beta subunit + no data
GFF5348 Probable transmembrane protein + no data
GFF5349 Heat shock (predicted periplasmic) protein YciM, precursor + no data
GFF5350 5-oxoprolinase (EC 3.5.2.9) - cofit
GFF5351 Predicted transcription regulator, contains HTH domain (MarR family) - strong
GFF5352 TRAP transporter solute receptor, unknown substrate 5 + cofit
GFF5353 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 5 + insig.
GFF5354 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 5 + insig.
GFF5355 DNA recombination-dependent growth factor C + no data
GFF5356 Protein crcB homolog + insig.
GFF5357 Transcriptional regulator, AraC family - insig.

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