Gene info for GFF5346 in Variovorax sp. SCN45

Annotation: Putative outer membrane lipoprotein
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 224,775 to 225,587
See nucleotide sequence around GFF5346 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5341 and GFF5342 are separated by 20 nucleotidesGFF5342 and GFF5343 are separated by 41 nucleotidesGFF5343 and GFF5344 overlap by 4 nucleotidesGFF5344 and GFF5345 are separated by 20 nucleotidesGFF5345 and GFF5346 are separated by 32 nucleotidesGFF5346 and GFF5347 are separated by 10 nucleotidesGFF5347 and GFF5348 overlap by 4 nucleotidesGFF5348 and GFF5349 overlap by 4 nucleotidesGFF5349 and GFF5350 are separated by 19 nucleotidesGFF5350 and GFF5351 are separated by 63 nucleotides GFF5341 - Efflux ABC transporter, permease protein, at 220,400 to 221,164 GFF5341 GFF5342 - YrbA protein, at 221,185 to 221,427 GFF5342 GFF5343 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7), at 221,469 to 222,761 GFF5343 GFF5344 - ATP phosphoribosyltransferase (EC 2.4.2.17) => HisGs, at 222,758 to 223,399 GFF5344 GFF5345 - Histidinol dehydrogenase (EC 1.1.1.23), at 223,420 to 224,742 GFF5345 GFF5346 - Putative outer membrane lipoprotein, at 224,775 to 225,587 GFF5346 GFF5347 - hypothetical protein, at 225,598 to 225,948 GFF5347 GFF5348 - Histidinol-phosphate aminotransferase (EC 2.6.1.9), at 225,945 to 227,036 GFF5348 GFF5349 - Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 227,033 to 227,650 GFF5349 GFF5350 - Imidazole glycerol phosphate synthase amidotransferase subunit HisH, at 227,670 to 228,326 GFF5350 GFF5351 - Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16), at 228,390 to 229,130 GFF5351
Locus Name Description Strand Phenotype
GFF5341 Efflux ABC transporter, permease protein + insig.
GFF5342 YrbA protein + insig.
GFF5343 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) + no data
GFF5344 ATP phosphoribosyltransferase (EC 2.4.2.17) => HisGs + no data
GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) + no data
GFF5346 Putative outer membrane lipoprotein + insig.
GFF5347 hypothetical protein + insig.
GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) + cofit
GFF5349 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) + no data
GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH + no data
GFF5351 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) + no data

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