Gene info for GFF5324 in Variovorax sp. SCN45

Annotation: Shikimate kinase I (EC 2.7.1.71)
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 201,927 to 202,412
See nucleotide sequence around GFF5324 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5319 and GFF5320 overlap by 4 nucleotidesGFF5320 and GFF5321 are separated by 6 nucleotidesGFF5321 and GFF5322 overlap by 4 nucleotidesGFF5322 and GFF5323 overlap by 4 nucleotidesGFF5323 and GFF5324 are separated by 86 nucleotidesGFF5324 and GFF5325 are separated by 34 nucleotidesGFF5325 and GFF5326 overlap by 4 nucleotidesGFF5326 and GFF5327 overlap by 4 nucleotidesGFF5327 and GFF5328 overlap by 4 nucleotidesGFF5328 and GFF5329 overlap by 4 nucleotides GFF5319 - Type IV pilus biogenesis protein PilM, at 196,744 to 197,823 GFF5319 GFF5320 - Type IV pilus biogenesis protein PilN, at 197,820 to 198,443 GFF5320 GFF5321 - Type IV pilus biogenesis protein PilO, at 198,450 to 199,127 GFF5321 GFF5322 - Type IV pilus biogenesis protein PilP, at 199,124 to 199,663 GFF5322 GFF5323 - Type IV pilus biogenesis protein PilQ, at 199,660 to 201,840 GFF5323 GFF5324 - Shikimate kinase I (EC 2.7.1.71), at 201,927 to 202,412 GFF5324 GFF5325 - 3-dehydroquinate synthase (EC 4.2.3.4), at 202,447 to 203,556 GFF5325 GFF5326 - Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), at 203,553 to 204,683 GFF5326 GFF5327 - Uncharacterized MFS-type transporter, at 204,680 to 205,936 GFF5327 GFF5328 - FIG00537720: hypothetical protein, at 205,933 to 206,508 GFF5328 GFF5329 - SAM-dependent methyltransferase, at 206,505 to 207,389 GFF5329
Locus Name Description Strand Phenotype
GFF5319 Type IV pilus biogenesis protein PilM + strong
GFF5320 Type IV pilus biogenesis protein PilN + strong
GFF5321 Type IV pilus biogenesis protein PilO + strong
GFF5322 Type IV pilus biogenesis protein PilP + strong
GFF5323 Type IV pilus biogenesis protein PilQ + strong
GFF5324 Shikimate kinase I (EC 2.7.1.71) + insig.
GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) + cofit
GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) + insig.
GFF5327 Uncharacterized MFS-type transporter + insig.
GFF5328 FIG00537720: hypothetical protein + insig.
GFF5329 SAM-dependent methyltransferase + insig.

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