Gene info for GFF5322 in Variovorax sp. SCN45

Annotation: Type IV pilus biogenesis protein PilP
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 199,124 to 199,663
See nucleotide sequence around GFF5322 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5317 and GFF5318 are separated by 9 nucleotidesGFF5318 and GFF5319 are separated by 239 nucleotidesGFF5319 and GFF5320 overlap by 4 nucleotidesGFF5320 and GFF5321 are separated by 6 nucleotidesGFF5321 and GFF5322 overlap by 4 nucleotidesGFF5322 and GFF5323 overlap by 4 nucleotidesGFF5323 and GFF5324 are separated by 86 nucleotidesGFF5324 and GFF5325 are separated by 34 nucleotidesGFF5325 and GFF5326 overlap by 4 nucleotidesGFF5326 and GFF5327 overlap by 4 nucleotides GFF5317 - Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS, at 193,751 to 194,083 GFF5317 GFF5318 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 194,093 to 196,504 GFF5318 GFF5319 - Type IV pilus biogenesis protein PilM, at 196,744 to 197,823 GFF5319 GFF5320 - Type IV pilus biogenesis protein PilN, at 197,820 to 198,443 GFF5320 GFF5321 - Type IV pilus biogenesis protein PilO, at 198,450 to 199,127 GFF5321 GFF5322 - Type IV pilus biogenesis protein PilP, at 199,124 to 199,663 GFF5322 GFF5323 - Type IV pilus biogenesis protein PilQ, at 199,660 to 201,840 GFF5323 GFF5324 - Shikimate kinase I (EC 2.7.1.71), at 201,927 to 202,412 GFF5324 GFF5325 - 3-dehydroquinate synthase (EC 4.2.3.4), at 202,447 to 203,556 GFF5325 GFF5326 - Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1), at 203,553 to 204,683 GFF5326 GFF5327 - Uncharacterized MFS-type transporter, at 204,680 to 205,936 GFF5327
Locus Name Description Strand Phenotype
GFF5317 Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS + cofit
GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) - cofit
GFF5319 Type IV pilus biogenesis protein PilM + strong
GFF5320 Type IV pilus biogenesis protein PilN + strong
GFF5321 Type IV pilus biogenesis protein PilO + strong
GFF5322 Type IV pilus biogenesis protein PilP + strong
GFF5323 Type IV pilus biogenesis protein PilQ + strong
GFF5324 Shikimate kinase I (EC 2.7.1.71) + insig.
GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) + cofit
GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) + insig.
GFF5327 Uncharacterized MFS-type transporter + insig.

Or browse nearby genes

Or see the comparative fitness browser