Gene info for GFF5317 in Variovorax sp. SCN45

Annotation: Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 193,751 to 194,083
See nucleotide sequence around GFF5317 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5312 and GFF5313 are separated by 116 nucleotidesGFF5313 and GFF5314 are separated by 28 nucleotidesGFF5314 and GFF5315 are separated by 18 nucleotidesGFF5315 and GFF5316 overlap by 4 nucleotidesGFF5316 and GFF5317 are separated by 63 nucleotidesGFF5317 and GFF5318 are separated by 9 nucleotidesGFF5318 and GFF5319 are separated by 239 nucleotidesGFF5319 and GFF5320 overlap by 4 nucleotidesGFF5320 and GFF5321 are separated by 6 nucleotidesGFF5321 and GFF5322 overlap by 4 nucleotides GFF5312 - Cytochrome c-type biogenesis protein CcsA/ResC, at 189,009 to 190,325 GFF5312 GFF5313 - Protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 190,442 to 191,467 GFF5313 GFF5314 - Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 191,496 to 192,155 GFF5314 GFF5315 - Diaminopimelate decarboxylase (EC 4.1.1.20), at 192,174 to 193,463 GFF5315 GFF5316 - Diaminopimelate decarboxylase and/or diaminopimelate epimerase leader peptide, at 193,460 to 193,687 GFF5316 GFF5317 - Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS, at 193,751 to 194,083 GFF5317 GFF5318 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 194,093 to 196,504 GFF5318 GFF5319 - Type IV pilus biogenesis protein PilM, at 196,744 to 197,823 GFF5319 GFF5320 - Type IV pilus biogenesis protein PilN, at 197,820 to 198,443 GFF5320 GFF5321 - Type IV pilus biogenesis protein PilO, at 198,450 to 199,127 GFF5321 GFF5322 - Type IV pilus biogenesis protein PilP, at 199,124 to 199,663 GFF5322
Locus Name Description Strand Phenotype
GFF5312 Cytochrome c-type biogenesis protein CcsA/ResC + no data
GFF5313 Protein-methionine-sulfoxide reductase catalytic subunit MsrP + insig.
GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ + insig.
GFF5315 Diaminopimelate decarboxylase (EC 4.1.1.20) - no data
GFF5316 Diaminopimelate decarboxylase and/or diaminopimelate epimerase leader peptide - no data
GFF5317 Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS + cofit
GFF5318 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) - cofit
GFF5319 Type IV pilus biogenesis protein PilM + strong
GFF5320 Type IV pilus biogenesis protein PilN + strong
GFF5321 Type IV pilus biogenesis protein PilO + strong
GFF5322 Type IV pilus biogenesis protein PilP + strong

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