Gene info for GFF5301 in Variovorax sp. SCN45

Annotation: ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, - strand, nucleotides 176,891 to 177,709
See nucleotide sequence around GFF5301 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5296 and GFF5297 overlap by 4 nucleotidesGFF5297 and GFF5298 are separated by 171 nucleotidesGFF5298 and GFF5299 are separated by 71 nucleotidesGFF5299 and GFF5300 are separated by 57 nucleotidesGFF5300 and GFF5301 are separated by 17 nucleotidesGFF5301 and GFF5302 are separated by 2 nucleotidesGFF5302 and GFF5303 are separated by 174 nucleotidesGFF5303 and GFF5304 are separated by 1 nucleotidesGFF5304 and GFF5305 are separated by 21 nucleotidesGFF5305 and GFF5306 are separated by 217 nucleotides GFF5296 - putative iron-regulated membrane protein, at 169,982 to 171,154 GFF5296 GFF5297 - hypothetical protein, at 171,151 to 171,345 GFF5297 GFF5298 - FIG01204242: hypothetical protein, at 171,517 to 173,733 GFF5298 GFF5299 - TonB-dependent receptor, at 173,805 to 175,940 GFF5299 GFF5300 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 175,998 to 176,873 GFF5300 GFF5301 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 176,891 to 177,709 GFF5301 GFF5302 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 177,712 to 178,752 GFF5302 GFF5303 - Tricarboxylate transport transcriptional regulator TctD, at 178,927 to 179,601 GFF5303 GFF5304 - no description, at 179,603 to 181,039 GFF5304 GFF5305 - S-adenosylmethionine synthetase (EC 2.5.1.6), at 181,061 to 182,248 GFF5305 GFF5306 - Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241), at 182,466 to 183,356 GFF5306
Locus Name Description Strand Phenotype
GFF5296 putative iron-regulated membrane protein + insig.
GFF5297 hypothetical protein + no data
GFF5298 FIG01204242: hypothetical protein + insig.
GFF5299 TonB-dependent receptor + insig.
GFF5300 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5302 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5303 Tricarboxylate transport transcriptional regulator TctD + insig.
GFF5304 no description + insig.
GFF5305 S-adenosylmethionine synthetase (EC 2.5.1.6) - no data
GFF5306 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) + no data

Or browse nearby genes

Or see the comparative fitness browser