Gene info for GFF5299 in Variovorax sp. SCN45

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 173,805 to 175,940
See nucleotide sequence around GFF5299 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5294 and GFF5295 are separated by 179 nucleotidesGFF5295 and GFF5296 are separated by 33 nucleotidesGFF5296 and GFF5297 overlap by 4 nucleotidesGFF5297 and GFF5298 are separated by 171 nucleotidesGFF5298 and GFF5299 are separated by 71 nucleotidesGFF5299 and GFF5300 are separated by 57 nucleotidesGFF5300 and GFF5301 are separated by 17 nucleotidesGFF5301 and GFF5302 are separated by 2 nucleotidesGFF5302 and GFF5303 are separated by 174 nucleotidesGFF5303 and GFF5304 are separated by 1 nucleotides GFF5294 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 166,059 to 167,648 GFF5294 GFF5295 - Ferrichrome-iron receptor, at 167,828 to 169,948 GFF5295 GFF5296 - putative iron-regulated membrane protein, at 169,982 to 171,154 GFF5296 GFF5297 - hypothetical protein, at 171,151 to 171,345 GFF5297 GFF5298 - FIG01204242: hypothetical protein, at 171,517 to 173,733 GFF5298 GFF5299 - TonB-dependent receptor, at 173,805 to 175,940 GFF5299 GFF5300 - ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate), at 175,998 to 176,873 GFF5300 GFF5301 - ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 176,891 to 177,709 GFF5301 GFF5302 - ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate), at 177,712 to 178,752 GFF5302 GFF5303 - Tricarboxylate transport transcriptional regulator TctD, at 178,927 to 179,601 GFF5303 GFF5304 - no description, at 179,603 to 181,039 GFF5304
Locus Name Description Strand Phenotype
GFF5294 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC - insig.
GFF5295 Ferrichrome-iron receptor + insig.
GFF5296 putative iron-regulated membrane protein + insig.
GFF5297 hypothetical protein + no data
GFF5298 FIG01204242: hypothetical protein + insig.
GFF5299 TonB-dependent receptor + insig.
GFF5300 ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5302 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) - insig.
GFF5303 Tricarboxylate transport transcriptional regulator TctD + insig.
GFF5304 no description + insig.

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