Gene info for GFF5284 in Variovorax sp. SCN45

Annotation: RNA polymerase ECF-type sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 153,185 to 153,694
See nucleotide sequence around GFF5284 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5279 and GFF5280 are separated by 11 nucleotidesGFF5280 and GFF5281 are separated by 26 nucleotidesGFF5281 and GFF5282 are separated by 149 nucleotidesGFF5282 and GFF5283 are separated by 29 nucleotidesGFF5283 and GFF5284 are separated by 254 nucleotidesGFF5284 and GFF5285 overlap by 1 nucleotidesGFF5285 and GFF5286 are separated by 122 nucleotidesGFF5286 and GFF5287 are separated by 1 nucleotidesGFF5287 and GFF5288 are separated by 13 nucleotidesGFF5288 and GFF5289 overlap by 4 nucleotides GFF5279 - Fructokinase (EC 2.7.1.4), at 147,379 to 148,347 GFF5279 GFF5280 - Transcriptional regulator of various polyols utilization, AraC family, at 148,359 to 149,315 GFF5280 GFF5281 - Xylulose kinase (EC 2.7.1.17), at 149,342 to 150,808 GFF5281 GFF5282 - Heat shock protein 60 kDa family chaperone GroEL, at 150,958 to 152,610 GFF5282 GFF5283 - Heat shock protein 10 kDa family chaperone GroES, at 152,640 to 152,930 GFF5283 GFF5284 - RNA polymerase ECF-type sigma factor, at 153,185 to 153,694 GFF5284 GFF5285 - Fe2+-dicitrate sensor, membrane component, at 153,694 to 154,719 GFF5285 GFF5286 - Ferrichrome-iron receptor, at 154,842 to 157,322 GFF5286 GFF5287 - FIG00455092: hypothetical protein, at 157,324 to 158,043 GFF5287 GFF5288 - Uncharacterized protein PA4513, at 158,057 to 160,672 GFF5288 GFF5289 - hypothetical protein, at 160,669 to 161,424 GFF5289
Locus Name Description Strand Phenotype
GFF5279 Fructokinase (EC 2.7.1.4) + sig.
GFF5280 Transcriptional regulator of various polyols utilization, AraC family + insig.
GFF5281 Xylulose kinase (EC 2.7.1.17) + insig.
GFF5282 Heat shock protein 60 kDa family chaperone GroEL - no data
GFF5283 Heat shock protein 10 kDa family chaperone GroES - no data
GFF5284 RNA polymerase ECF-type sigma factor + insig.
GFF5285 Fe2+-dicitrate sensor, membrane component + insig.
GFF5286 Ferrichrome-iron receptor + insig.
GFF5287 FIG00455092: hypothetical protein + insig.
GFF5288 Uncharacterized protein PA4513 + insig.
GFF5289 hypothetical protein - insig.

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