Gene info for GFF5280 in Variovorax sp. SCN45

Annotation: Transcriptional regulator of various polyols utilization, AraC family
Type 1: Protein-coding gene
Located on scaffold scaffold00000013, + strand, nucleotides 148,359 to 149,315
See nucleotide sequence around GFF5280 or for all of scaffold scaffold00000013

Nearby Genes

500 ntGFF5275 and GFF5276 are separated by 43 nucleotidesGFF5276 and GFF5277 overlap by 4 nucleotidesGFF5277 and GFF5278 are separated by 22 nucleotidesGFF5278 and GFF5279 are separated by 30 nucleotidesGFF5279 and GFF5280 are separated by 11 nucleotidesGFF5280 and GFF5281 are separated by 26 nucleotidesGFF5281 and GFF5282 are separated by 149 nucleotidesGFF5282 and GFF5283 are separated by 29 nucleotidesGFF5283 and GFF5284 are separated by 254 nucleotidesGFF5284 and GFF5285 overlap by 1 nucleotides GFF5275 - Various polyols ABC transporter, ATP-binding protein, at 143,349 to 144,389 GFF5275 GFF5276 - D-arabinitol 4-dehydrogenase (EC 1.1.1.11), at 144,433 to 145,869 GFF5276 GFF5277 - Sorbitol dehydrogenase (EC 1.1.1.14), at 145,866 to 146,654 GFF5277 GFF5278 - Transaldolase (EC 2.2.1.2), at 146,677 to 147,348 GFF5278 GFF5279 - Fructokinase (EC 2.7.1.4), at 147,379 to 148,347 GFF5279 GFF5280 - Transcriptional regulator of various polyols utilization, AraC family, at 148,359 to 149,315 GFF5280 GFF5281 - Xylulose kinase (EC 2.7.1.17), at 149,342 to 150,808 GFF5281 GFF5282 - Heat shock protein 60 kDa family chaperone GroEL, at 150,958 to 152,610 GFF5282 GFF5283 - Heat shock protein 10 kDa family chaperone GroES, at 152,640 to 152,930 GFF5283 GFF5284 - RNA polymerase ECF-type sigma factor, at 153,185 to 153,694 GFF5284 GFF5285 - Fe2+-dicitrate sensor, membrane component, at 153,694 to 154,719 GFF5285
Locus Name Description Strand Phenotype
GFF5275 Various polyols ABC transporter, ATP-binding protein + insig.
GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) + strong
GFF5277 Sorbitol dehydrogenase (EC 1.1.1.14) + insig.
GFF5278 Transaldolase (EC 2.2.1.2) + insig.
GFF5279 Fructokinase (EC 2.7.1.4) + sig.
GFF5280 Transcriptional regulator of various polyols utilization, AraC family + insig.
GFF5281 Xylulose kinase (EC 2.7.1.17) + insig.
GFF5282 Heat shock protein 60 kDa family chaperone GroEL - no data
GFF5283 Heat shock protein 10 kDa family chaperone GroES - no data
GFF5284 RNA polymerase ECF-type sigma factor + insig.
GFF5285 Fe2+-dicitrate sensor, membrane component + insig.

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