Gene info for GFF5230 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: TRAP-type C4-dicarboxylate transport system, large permease component
Type 1: Protein-coding gene
Located on scaffold scaffold1.1, + strand, nucleotides 2,245,949 to 2,247,232
See nucleotide sequence around GFF5230 or for all of scaffold scaffold1.1

Nearby Genes

500 ntGFF5225 and GFF5226 are separated by 77 nucleotidesGFF5226 and GFF5227 overlap by 4 nucleotidesGFF5227 and GFF5228 are separated by 37 nucleotidesGFF5228 and GFF5229 are separated by 110 nucleotidesGFF5229 and GFF5230 are separated by 18 nucleotidesGFF5230 and GFF5231 are separated by 93 nucleotidesGFF5231 and GFF5232 are separated by 20 nucleotidesGFF5232 and GFF5233 are separated by 53 nucleotidesGFF5233 and GFF5234 are separated by 2 nucleotidesGFF5234 and GFF5235 are separated by 7 nucleotides GFF5225 - 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain, at 2,242,114 to 2,242,779 GFF5225 GFF5226 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 2,242,857 to 2,243,678 GFF5226 GFF5227 - Permease of the drug/metabolite transporter (DMT) superfamily, at 2,243,675 to 2,244,556 GFF5227 GFF5228 - Transcriptional regulator, TetR family, at 2,244,594 to 2,245,274 GFF5228 GFF5229 - TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter, at 2,245,385 to 2,245,930 GFF5229 GFF5230 - TRAP-type C4-dicarboxylate transport system, large permease component, at 2,245,949 to 2,247,232 GFF5230 GFF5231 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 2,247,326 to 2,248,327 GFF5231 GFF5232 - FIG00460847: hypothetical protein, at 2,248,348 to 2,249,397 GFF5232 GFF5233 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 2,249,451 to 2,249,885 GFF5233 GFF5234 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 2,249,888 to 2,250,721 GFF5234 GFF5235 - Membrane protein, putative, at 2,250,729 to 2,251,598 GFF5235
Locus Name Description Strand Phenotype
GFF5225 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain - insig.
GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) + strong
GFF5227 Permease of the drug/metabolite transporter (DMT) superfamily + insig.
GFF5228 Transcriptional regulator, TetR family + strong
GFF5229 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter + insig.
GFF5230 TRAP-type C4-dicarboxylate transport system, large permease component + insig.
GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component + insig.
GFF5232 FIG00460847: hypothetical protein + insig.
GFF5233 3-dehydroquinate dehydratase II (EC 4.2.1.10) + no data
GFF5234 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) + strong
GFF5235 Membrane protein, putative + insig.

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