Gene info for GFF5134 in Sphingobium sp. HT1-2

Annotation: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
Type 1: Protein-coding gene
Located on scaffold 165695.215, - strand, nucleotides 5,124,984 to 5,127,497
See nucleotide sequence around GFF5134 or for all of scaffold 165695.215

Nearby Genes

500 ntGFF5129 and GFF5130 overlap by 4 nucleotidesGFF5130 and GFF5131 overlap by 4 nucleotidesGFF5131 and GFF5132 overlap by 4 nucleotidesGFF5132 and GFF5133 are separated by 16 nucleotidesGFF5133 and GFF5134 are separated by 65 nucleotidesGFF5134 and GFF5135 overlap by 4 nucleotidesGFF5135 and GFF5136 overlap by 1 nucleotidesGFF5136 and GFF5137 are separated by 327 nucleotidesGFF5137 and GFF5138 are separated by 25 nucleotidesGFF5138 and GFF5139 are separated by 33 nucleotides GFF5129 - Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1), at 5,120,256 to 5,122,778 GFF5129 GFF5130 - conserved hypothetical protein-transmembrane prediction, at 5,122,775 to 5,123,152 GFF5130 GFF5131 - Cytochrome c oxidase caa3-type assembly factor CtaG_BS (unrelated to Cox11-CtaG family), at 5,123,149 to 5,123,745 GFF5131 GFF5132 - Probable cytochrome c-552, at 5,123,742 to 5,124,782 GFF5132 GFF5133 - hypothetical protein, at 5,124,799 to 5,124,918 GFF5133 GFF5134 - ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD, at 5,124,984 to 5,127,497 GFF5134 GFF5135 - Mg(2+)-transport-ATPase-associated protein MgtC, at 5,127,494 to 5,127,970 GFF5135 GFF5136 - Ku domain protein, at 5,127,970 to 5,128,854 GFF5136 GFF5137 - hypothetical protein, at 5,129,182 to 5,129,790 GFF5137 GFF5138 - Mobile element protein, at 5,129,816 to 5,130,013 GFF5138 GFF5139 - hypothetical protein, at 5,130,047 to 5,130,781 GFF5139
Locus Name Description Strand Phenotype
GFF5129 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) / Cytochrome c oxidase polypeptide III (EC 1.9.3.1) + insig.
GFF5130 conserved hypothetical protein-transmembrane prediction + cofit
GFF5131 Cytochrome c oxidase caa3-type assembly factor CtaG_BS (unrelated to Cox11-CtaG family) + cofit
GFF5132 Probable cytochrome c-552 + cofit
GFF5133 hypothetical protein - no data
GFF5134 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD - cofit
GFF5135 Mg(2+)-transport-ATPase-associated protein MgtC - insig.
GFF5136 Ku domain protein - cofit
GFF5137 hypothetical protein + cofit
GFF5138 Mobile element protein - no data
GFF5139 hypothetical protein - cofit

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