Gene info for GFF5088 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000012, - strand, nucleotides 191,959 to 192,978
See nucleotide sequence around GFF5088 or for all of scaffold scaffold00000012

Nearby Genes

500 ntGFF5083 and GFF5084 are separated by 7 nucleotidesGFF5084 and GFF5085 are separated by 184 nucleotidesGFF5085 and GFF5086 are separated by 62 nucleotidesGFF5086 and GFF5087 are separated by 37 nucleotidesGFF5087 and GFF5088 are separated by 31 nucleotidesGFF5088 and GFF5089 are separated by 107 nucleotidesGFF5089 and GFF5090 are separated by 145 nucleotidesGFF5090 and GFF5091 overlap by 4 nucleotidesGFF5091 and GFF5092 overlap by 4 nucleotidesGFF5092 and GFF5093 overlap by 4 nucleotides GFF5083 - Transcriptional regulator, LysR family, at 186,886 to 187,833 GFF5083 GFF5084 - FIG00933367: hypothetical protein, at 187,841 to 188,278 GFF5084 GFF5085 - hypothetical protein, at 188,463 to 188,918 GFF5085 GFF5086 - Glycine betaine transporter OpuD, at 188,981 to 190,495 GFF5086 GFF5087 - DNA repair protein RadA, at 190,533 to 191,927 GFF5087 GFF5088 - hypothetical protein, at 191,959 to 192,978 GFF5088 GFF5089 - Transcriptional regulator, MarR family, at 193,086 to 193,592 GFF5089 GFF5090 - Homoprotocatechuate degradative operon repressor, at 193,738 to 194,175 GFF5090 GFF5091 - 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68), at 194,172 to 194,804 GFF5091 GFF5092 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-), at 194,801 to 195,583 GFF5092 GFF5093 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60), at 195,580 to 197,043 GFF5093
Locus Name Description Strand Phenotype
GFF5083 Transcriptional regulator, LysR family + no data
GFF5084 FIG00933367: hypothetical protein - insig.
GFF5085 hypothetical protein + sig.
GFF5086 Glycine betaine transporter OpuD - insig.
GFF5087 DNA repair protein RadA - insig.
GFF5088 hypothetical protein - insig.
GFF5089 Transcriptional regulator, MarR family + no data
GFF5090 Homoprotocatechuate degradative operon repressor + insig.
GFF5091 5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylase (EC 4.1.1.68) + insig.
GFF5092 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-) + insig.
GFF5093 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) + insig.

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