Gene info for GFF5085 in Sphingobium sp. HT1-2

Annotation: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
Type 1: Protein-coding gene
Located on scaffold 165695.215, + strand, nucleotides 5,077,538 to 5,078,479
See nucleotide sequence around GFF5085 or for all of scaffold 165695.215

Nearby Genes

500 ntGFF5080 and GFF5081 are separated by 2 nucleotidesGFF5081 and GFF5082 are separated by 269 nucleotidesGFF5082 and GFF5083 are separated by 45 nucleotidesGFF5083 and GFF5084 are separated by 38 nucleotidesGFF5084 and GFF5085 are separated by 118 nucleotidesGFF5085 and GFF5086 are separated by 9 nucleotidesGFF5086 and GFF5087 overlap by 8 nucleotidesGFF5087 and GFF5088 are separated by 101 nucleotidesGFF5088 and GFF5089 overlap by 32 nucleotidesGFF5089 and GFF5090 are separated by 47 nucleotides GFF5080 - hypothetical protein, at 5,074,264 to 5,074,857 GFF5080 GFF5081 - tRNA-Ser-TGA, at 5,074,860 to 5,074,946 GFF5081 GFF5082 - Short-chain dehydrodenase (gene dltE), at 5,075,216 to 5,075,980 GFF5082 GFF5083 - hypothetical protein, at 5,076,026 to 5,076,577 GFF5083 GFF5084 - Short-chain dehydrogenases of various substrate specificities, at 5,076,616 to 5,077,419 GFF5084 GFF5085 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 5,077,538 to 5,078,479 GFF5085 GFF5086 - hypothetical protein, at 5,078,489 to 5,078,800 GFF5086 GFF5087 - Zinc-type alcohol dehydrogenase-like protein, at 5,078,793 to 5,079,818 GFF5087 GFF5088 - Transcriptional regulator, HxlR family, at 5,079,920 to 5,080,267 GFF5088 GFF5089 - hypothetical protein, at 5,080,236 to 5,080,874 GFF5089 GFF5090 - Endonuclease, at 5,080,922 to 5,081,674 GFF5090
Locus Name Description Strand Phenotype
GFF5080 hypothetical protein + cofit
GFF5081 tRNA-Ser-TGA - no data
GFF5082 Short-chain dehydrodenase (gene dltE) - cofit
GFF5083 hypothetical protein - cofit
GFF5084 Short-chain dehydrogenases of various substrate specificities - cofit
GFF5085 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain + cofit
GFF5086 hypothetical protein - cofit
GFF5087 Zinc-type alcohol dehydrogenase-like protein - cofit
GFF5088 Transcriptional regulator, HxlR family + cofit
GFF5089 hypothetical protein + cofit
GFF5090 Endonuclease - insig.

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