Gene info for GFF5054 in Variovorax sp. SCN45

Annotation: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Type 1: Protein-coding gene
Located on scaffold scaffold00000012, + strand, nucleotides 154,809 to 156,119
See nucleotide sequence around GFF5054 or for all of scaffold scaffold00000012

Nearby Genes

500 ntGFF5049 and GFF5050 overlap by 4 nucleotidesGFF5050 and GFF5051 are separated by 145 nucleotidesGFF5051 and GFF5052 are separated by 152 nucleotidesGFF5052 and GFF5053 overlap by 4 nucleotidesGFF5053 and GFF5054 are separated by 59 nucleotidesGFF5054 and GFF5055 overlap by 4 nucleotidesGFF5055 and GFF5056 are separated by 22 nucleotidesGFF5056 and GFF5057 are separated by 128 nucleotidesGFF5057 and GFF5058 are separated by 54 nucleotidesGFF5058 and GFF5059 overlap by 4 nucleotides GFF5049 - NAD-dependent protein deacetylase of SIR2 family, at 150,036 to 150,785 GFF5049 GFF5050 - Transcriptional regulator, IclR family, at 150,782 to 151,642 GFF5050 GFF5051 - MBL-fold metallohydrolase SPO0683, at 151,788 to 152,747 GFF5051 GFF5052 - FAD-dependent oxidoreductase SPO0682, at 152,900 to 154,540 GFF5052 GFF5053 - Uncharacterized protein SPO0681, at 154,537 to 154,749 GFF5053 GFF5054 - Homogentisate 1,2-dioxygenase (EC 1.13.11.5), at 154,809 to 156,119 GFF5054 GFF5055 - BUG/TctC family periplasmic protein, at 156,116 to 157,090 GFF5055 GFF5056 - Fumarylacetoacetase (EC 3.7.1.2), at 157,113 to 158,378 GFF5056 GFF5057 - Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4), at 158,507 to 160,480 GFF5057 GFF5058 - Rod shape-determining protein MreD, at 160,535 to 161,056 GFF5058 GFF5059 - Rod shape-determining protein MreC, at 161,053 to 162,012 GFF5059
Locus Name Description Strand Phenotype
GFF5049 NAD-dependent protein deacetylase of SIR2 family - insig.
GFF5050 Transcriptional regulator, IclR family - cofit
GFF5051 MBL-fold metallohydrolase SPO0683 + insig.
GFF5052 FAD-dependent oxidoreductase SPO0682 + insig.
GFF5053 Uncharacterized protein SPO0681 + insig.
GFF5054 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) + insig.
GFF5055 BUG/TctC family periplasmic protein + insig.
GFF5056 Fumarylacetoacetase (EC 3.7.1.2) + insig.
GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) - cofit
GFF5058 Rod shape-determining protein MreD - no data
GFF5059 Rod shape-determining protein MreC - no data

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