Gene info for GFF5046 in Variovorax sp. SCN45

Annotation: putative lipoprotein
Type 1: Protein-coding gene
Located on scaffold scaffold00000012, + strand, nucleotides 147,943 to 148,656
See nucleotide sequence around GFF5046 or for all of scaffold scaffold00000012

Nearby Genes

500 ntGFF5041 and GFF5042 are separated by 119 nucleotidesGFF5042 and GFF5043 are separated by 182 nucleotidesGFF5043 and GFF5044 are separated by 4 nucleotidesGFF5044 and GFF5045 are separated by 16 nucleotidesGFF5045 and GFF5046 are separated by 18 nucleotidesGFF5046 and GFF5047 are separated by 28 nucleotidesGFF5047 and GFF5048 are separated by 22 nucleotidesGFF5048 and GFF5049 are separated by 90 nucleotidesGFF5049 and GFF5050 overlap by 4 nucleotidesGFF5050 and GFF5051 are separated by 145 nucleotides GFF5041 - Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18), at 142,186 to 143,697 GFF5041 GFF5042 - Transcriptional regulator, LysR family, at 143,817 to 144,749 GFF5042 GFF5043 - ABC transporter, permease protein (cluster 9, phospholipid), at 144,932 to 146,098 GFF5043 GFF5044 - ABC transporter, ATP-binding protein (cluster 9, phospholipid), at 146,103 to 146,948 GFF5044 GFF5045 - ABC transporter, substrate-binding protein (cluster 9, phospholipid), at 146,965 to 147,924 GFF5045 GFF5046 - putative lipoprotein, at 147,943 to 148,656 GFF5046 GFF5047 - hypothetical protein, at 148,685 to 148,906 GFF5047 GFF5048 - no description, at 148,929 to 149,945 GFF5048 GFF5049 - NAD-dependent protein deacetylase of SIR2 family, at 150,036 to 150,785 GFF5049 GFF5050 - Transcriptional regulator, IclR family, at 150,782 to 151,642 GFF5050 GFF5051 - MBL-fold metallohydrolase SPO0683, at 151,788 to 152,747 GFF5051
Locus Name Description Strand Phenotype
GFF5041 Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18) - strong
GFF5042 Transcriptional regulator, LysR family + insig.
GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) + insig.
GFF5044 ABC transporter, ATP-binding protein (cluster 9, phospholipid) + insig.
GFF5045 ABC transporter, substrate-binding protein (cluster 9, phospholipid) + insig.
GFF5046 putative lipoprotein + insig.
GFF5047 hypothetical protein + insig.
GFF5048 no description - insig.
GFF5049 NAD-dependent protein deacetylase of SIR2 family - insig.
GFF5050 Transcriptional regulator, IclR family - cofit
GFF5051 MBL-fold metallohydrolase SPO0683 + insig.

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