Gene info for GFF498 in Variovorax sp. SCN45

Annotation: Squalene/phytoene desaturase HopC
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, + strand, nucleotides 542,122 to 543,378
See nucleotide sequence around GFF498 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF493 and GFF494 overlap by 4 nucleotidesGFF494 and GFF495 are separated by 130 nucleotidesGFF495 and GFF496 are separated by 153 nucleotidesGFF496 and GFF497 overlap by 4 nucleotidesGFF497 and GFF498 are separated by 127 nucleotidesGFF498 and GFF499 overlap by 4 nucleotidesGFF499 and GFF500 are separated by 16 nucleotidesGFF500 and GFF501 are separated by 119 nucleotidesGFF501 and GFF502 are separated by 4 nucleotidesGFF502 and GFF503 are separated by 17 nucleotides GFF493 - RND efflux system, inner membrane transporter, at 533,749 to 536,907 GFF493 GFF494 - RND efflux system, membrane fusion protein, at 536,904 to 538,115 GFF494 GFF495 - Kup system potassium uptake protein, at 538,246 to 540,090 GFF495 GFF496 - Squalene synthase (EC 2.5.1.21), at 540,244 to 541,158 GFF496 GFF497 - Phytoene synthase (EC 2.5.1.32), at 541,155 to 541,994 GFF497 GFF498 - Squalene/phytoene desaturase HopC, at 542,122 to 543,378 GFF498 GFF499 - hypothetical protein, at 543,375 to 543,683 GFF499 GFF500 - Lysine exporter protein (LYSE/YGGA), at 543,700 to 544,344 GFF500 GFF501 - hypothetical protein, at 544,464 to 544,769 GFF501 GFF502 - Hydrolase, at 544,774 to 545,505 GFF502 GFF503 - Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1), at 545,523 to 546,554 GFF503
Locus Name Description Strand Phenotype
GFF493 RND efflux system, inner membrane transporter - insig.
GFF494 RND efflux system, membrane fusion protein - insig.
GFF495 Kup system potassium uptake protein - insig.
GFF496 Squalene synthase (EC 2.5.1.21) + insig.
GFF497 Phytoene synthase (EC 2.5.1.32) + strong
GFF498 Squalene/phytoene desaturase HopC + insig.
GFF499 hypothetical protein + insig.
GFF500 Lysine exporter protein (LYSE/YGGA) - insig.
GFF501 hypothetical protein + insig.
GFF502 Hydrolase - insig.
GFF503 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) + no data

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