Gene info for GFF4977 in Variovorax sp. SCN45

Annotation: Transcriptional regulator for ferulate or vanillate catabolism
Type 1: Protein-coding gene
Located on scaffold scaffold00000012, + strand, nucleotides 77,317 to 78,036
See nucleotide sequence around GFF4977 or for all of scaffold scaffold00000012

Nearby Genes

500 ntGFF4972 and GFF4973 overlap by 4 nucleotidesGFF4973 and GFF4974 overlap by 4 nucleotidesGFF4974 and GFF4975 are separated by 13 nucleotidesGFF4975 and GFF4976 are separated by 43 nucleotidesGFF4976 and GFF4977 are separated by 146 nucleotidesGFF4977 and GFF4978 overlap by 26 nucleotidesGFF4978 and GFF4979 are separated by 119 nucleotidesGFF4979 and GFF4980 are separated by 53 nucleotidesGFF4980 and GFF4981 are separated by 86 nucleotidesGFF4981 and GFF4982 overlap by 4 nucleotides GFF4972 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 72,473 to 73,237 GFF4972 GFF4973 - Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1), at 73,234 to 74,217 GFF4973 GFF4974 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 74,214 to 75,116 GFF4974 GFF4975 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 75,130 to 76,347 GFF4975 GFF4976 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 76,391 to 77,170 GFF4976 GFF4977 - Transcriptional regulator for ferulate or vanillate catabolism, at 77,317 to 78,036 GFF4977 GFF4978 - Acyl-CoA thioesterase II (EC 3.1.2.-), at 78,011 to 78,910 GFF4978 GFF4979 - no description, at 79,030 to 79,719 GFF4979 GFF4980 - Transcriptional regulator, AsnC family, at 79,773 to 80,249 GFF4980 GFF4981 - Cysteine desulfurase (EC 2.8.1.7), at 80,336 to 82,597 GFF4981 GFF4982 - Thiol:disulfide interchange protein DsbC, at 82,594 to 83,154 GFF4982
Locus Name Description Strand Phenotype
GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) - cofit
GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) - insig.
GFF4974 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) - insig.
GFF4975 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) - insig.
GFF4976 Oxidoreductase, short-chain dehydrogenase/reductase family - insig.
GFF4977 Transcriptional regulator for ferulate or vanillate catabolism + cofit
GFF4978 Acyl-CoA thioesterase II (EC 3.1.2.-) - insig.
GFF4979 no description - insig.
GFF4980 Transcriptional regulator, AsnC family - insig.
GFF4981 Cysteine desulfurase (EC 2.8.1.7) + insig.
GFF4982 Thiol:disulfide interchange protein DsbC + insig.

Or browse nearby genes

Or see the comparative fitness browser