Gene info for GFF4829 in Variovorax sp. SCN45

Annotation: Isocitrate lyase (EC 4.1.3.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000011, + strand, nucleotides 198,708 to 200,039
See nucleotide sequence around GFF4829 or for all of scaffold scaffold00000011

Nearby Genes

500 ntGFF4824 and GFF4825 are separated by 88 nucleotidesGFF4825 and GFF4826 are separated by 154 nucleotidesGFF4826 and GFF4827 are separated by 71 nucleotidesGFF4827 and GFF4828 are separated by 7 nucleotidesGFF4828 and GFF4829 are separated by 73 nucleotidesGFF4829 and GFF4830 are separated by 96 nucleotidesGFF4830 and GFF4831 are separated by 115 nucleotidesGFF4831 and GFF4832 are separated by 217 nucleotidesGFF4832 and GFF4833 are separated by 176 nucleotidesGFF4833 and GFF4834 are separated by 151 nucleotides GFF4824 - Transcriptional regulator, AraC family, at 195,699 to 196,424 GFF4824 GFF4825 - SWIB/MDM2 domain-containing proteins, at 196,513 to 196,968 GFF4825 GFF4826 - Permease of the drug/metabolite transporter (DMT) superfamily, at 197,123 to 198,013 GFF4826 GFF4827 - FIG00348957: hypothetical protein, at 198,085 to 198,501 GFF4827 GFF4828 - no description, at 198,509 to 198,634 GFF4828 GFF4829 - Isocitrate lyase (EC 4.1.3.1), at 198,708 to 200,039 GFF4829 GFF4830 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 200,136 to 201,098 GFF4830 GFF4831 - Beta-glucoside bgl operon antiterminator, BglG family, at 201,214 to 201,525 GFF4831 GFF4832 - Threonyl-tRNA synthetase (EC 6.1.1.3), at 201,743 to 203,650 GFF4832 GFF4833 - Translation initiation factor 3, at 203,827 to 204,372 GFF4833 GFF4834 - LSU ribosomal protein L35p, at 204,524 to 204,727 GFF4834
Locus Name Description Strand Phenotype
GFF4824 Transcriptional regulator, AraC family + insig.
GFF4825 SWIB/MDM2 domain-containing proteins - cofit
GFF4826 Permease of the drug/metabolite transporter (DMT) superfamily - insig.
GFF4827 FIG00348957: hypothetical protein + insig.
GFF4828 no description - cofit
GFF4829 Isocitrate lyase (EC 4.1.3.1) + strong
GFF4830 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - insig.
GFF4831 Beta-glucoside bgl operon antiterminator, BglG family + no data
GFF4832 Threonyl-tRNA synthetase (EC 6.1.1.3) + no data
GFF4833 Translation initiation factor 3 + no data
GFF4834 LSU ribosomal protein L35p + no data

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