Gene info for GFF4824 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, AraC family
Type 1: Protein-coding gene
Located on scaffold scaffold00000011, + strand, nucleotides 195,699 to 196,424
See nucleotide sequence around GFF4824 or for all of scaffold scaffold00000011

Nearby Genes

500 ntGFF4819 and GFF4820 are separated by 46 nucleotidesGFF4820 and GFF4821 are separated by 158 nucleotidesGFF4821 and GFF4822 are separated by 94 nucleotidesGFF4822 and GFF4823 overlap by 41 nucleotidesGFF4823 and GFF4824 are separated by 121 nucleotidesGFF4824 and GFF4825 are separated by 88 nucleotidesGFF4825 and GFF4826 are separated by 154 nucleotidesGFF4826 and GFF4827 are separated by 71 nucleotidesGFF4827 and GFF4828 are separated by 7 nucleotidesGFF4828 and GFF4829 are separated by 73 nucleotides GFF4819 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 190,848 to 191,621 GFF4819 GFF4820 - BUG/TctC family periplasmic protein, at 191,668 to 192,660 GFF4820 GFF4821 - Transcriptional regulator, AcrR family, at 192,819 to 193,493 GFF4821 GFF4822 - Thiamine pyrophosphate-requiring enzymes, at 193,588 to 195,318 GFF4822 GFF4823 - hypothetical protein, at 195,278 to 195,577 GFF4823 GFF4824 - Transcriptional regulator, AraC family, at 195,699 to 196,424 GFF4824 GFF4825 - SWIB/MDM2 domain-containing proteins, at 196,513 to 196,968 GFF4825 GFF4826 - Permease of the drug/metabolite transporter (DMT) superfamily, at 197,123 to 198,013 GFF4826 GFF4827 - FIG00348957: hypothetical protein, at 198,085 to 198,501 GFF4827 GFF4828 - no description, at 198,509 to 198,634 GFF4828 GFF4829 - Isocitrate lyase (EC 4.1.3.1), at 198,708 to 200,039 GFF4829
Locus Name Description Strand Phenotype
GFF4819 Hydroxymethylpyrimidine ABC transporter, transmembrane component - insig.
GFF4820 BUG/TctC family periplasmic protein - insig.
GFF4821 Transcriptional regulator, AcrR family - cofit
GFF4822 Thiamine pyrophosphate-requiring enzymes + insig.
GFF4823 hypothetical protein - no data
GFF4824 Transcriptional regulator, AraC family + insig.
GFF4825 SWIB/MDM2 domain-containing proteins - cofit
GFF4826 Permease of the drug/metabolite transporter (DMT) superfamily - insig.
GFF4827 FIG00348957: hypothetical protein + insig.
GFF4828 no description - cofit
GFF4829 Isocitrate lyase (EC 4.1.3.1) + strong

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