Gene info for GFF481 in Variovorax sp. SCN45

Annotation: Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, + strand, nucleotides 519,773 to 520,948
See nucleotide sequence around GFF481 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF476 and GFF477 are separated by 9 nucleotidesGFF477 and GFF478 are separated by 119 nucleotidesGFF478 and GFF479 are separated by 51 nucleotidesGFF479 and GFF480 are separated by 502 nucleotidesGFF480 and GFF481 are separated by 21 nucleotidesGFF481 and GFF482 are separated by 17 nucleotidesGFF482 and GFF483 are separated by 56 nucleotidesGFF483 and GFF484 are separated by 1 nucleotidesGFF484 and GFF485 are separated by 18 nucleotidesGFF485 and GFF486 are separated by 31 nucleotides GFF476 - InterPro IPR005134 COGs COG2862, at 514,259 to 514,897 GFF476 GFF477 - Transcriptional regulator, LysR family, at 514,907 to 515,806 GFF477 GFF478 - Rrf2-linked NADH-flavin reductase, at 515,926 to 516,543 GFF478 GFF479 - Fumarate hydratase class II (EC 4.2.1.2), at 516,595 to 517,992 GFF479 GFF480 - Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1), at 518,495 to 519,751 GFF480 GFF481 - Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1), at 519,773 to 520,948 GFF481 GFF482 - Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1), at 520,966 to 521,985 GFF482 GFF483 - Fumarate hydratase class I, aerobic (EC 4.2.1.2), at 522,042 to 523,595 GFF483 GFF484 - Glutamate racemase (EC 5.1.1.3), at 523,597 to 524,397 GFF484 GFF485 - hypothetical protein, at 524,416 to 525,201 GFF485 GFF486 - FIG00582348: hypothetical protein, at 525,233 to 525,874 GFF486
Locus Name Description Strand Phenotype
GFF476 InterPro IPR005134 COGs COG2862 + insig.
GFF477 Transcriptional regulator, LysR family - insig.
GFF478 Rrf2-linked NADH-flavin reductase + insig.
GFF479 Fumarate hydratase class II (EC 4.2.1.2) - insig.
GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) + insig.
GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) + insig.
GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) + insig.
GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) + insig.
GFF484 Glutamate racemase (EC 5.1.1.3) + no data
GFF485 hypothetical protein + insig.
GFF486 FIG00582348: hypothetical protein - cofit

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