Gene info for GFF4796 in Variovorax sp. SCN45

Annotation: L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16)
Type 1: Protein-coding gene
Located on scaffold scaffold00000011, + strand, nucleotides 166,224 to 167,183
See nucleotide sequence around GFF4796 or for all of scaffold scaffold00000011

Nearby Genes

500 ntGFF4791 and GFF4792 overlap by 4 nucleotidesGFF4792 and GFF4793 are separated by 168 nucleotidesGFF4793 and GFF4794 are separated by 4 nucleotidesGFF4794 and GFF4795 overlap by 4 nucleotidesGFF4795 and GFF4796 are separated by 116 nucleotidesGFF4796 and GFF4797 are separated by 22 nucleotidesGFF4797 and GFF4798 overlap by 4 nucleotidesGFF4798 and GFF4799 are separated by 82 nucleotidesGFF4799 and GFF4800 are separated by 188 nucleotidesGFF4800 and GFF4801 are separated by 85 nucleotides GFF4791 - RNA polymerase ECF-type sigma factor, at 161,399 to 162,634 GFF4791 GFF4792 - PhnB protein, at 162,631 to 162,993 GFF4792 GFF4793 - Homoserine dehydrogenase (EC 1.1.1.3), at 163,162 to 164,523 GFF4793 GFF4794 - Ectoine hydroxylase (EC 1.17.-.-), at 164,528 to 165,403 GFF4794 GFF4795 - predicted biotin regulatory protein BioR (GntR family), at 165,400 to 166,107 GFF4795 GFF4796 - L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16), at 166,224 to 167,183 GFF4796 GFF4797 - ABC-type antimicrobial peptide transport system, ATPase component, at 167,206 to 167,856 GFF4797 GFF4798 - tRNA dimethylallyltransferase (EC 2.5.1.75), at 167,853 to 168,890 GFF4798 GFF4799 - hypothetical protein, at 168,973 to 169,947 GFF4799 GFF4800 - DNA mismatch repair protein MutL, at 170,136 to 172,061 GFF4800 GFF4801 - DedA protein, at 172,147 to 172,815 GFF4801
Locus Name Description Strand Phenotype
GFF4791 RNA polymerase ECF-type sigma factor - insig.
GFF4792 PhnB protein - insig.
GFF4793 Homoserine dehydrogenase (EC 1.1.1.3) - insig.
GFF4794 Ectoine hydroxylase (EC 1.17.-.-) - insig.
GFF4795 predicted biotin regulatory protein BioR (GntR family) - insig.
GFF4796 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) + insig.
GFF4797 ABC-type antimicrobial peptide transport system, ATPase component - no data
GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) - no data
GFF4799 hypothetical protein - insig.
GFF4800 DNA mismatch repair protein MutL - insig.
GFF4801 DedA protein + insig.

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