Gene info for GFF477 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, - strand, nucleotides 514,907 to 515,806
See nucleotide sequence around GFF477 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF472 and GFF473 are separated by 74 nucleotidesGFF473 and GFF474 are separated by 24 nucleotidesGFF474 and GFF475 are separated by 137 nucleotidesGFF475 and GFF476 are separated by 157 nucleotidesGFF476 and GFF477 are separated by 9 nucleotidesGFF477 and GFF478 are separated by 119 nucleotidesGFF478 and GFF479 are separated by 51 nucleotidesGFF479 and GFF480 are separated by 502 nucleotidesGFF480 and GFF481 are separated by 21 nucleotidesGFF481 and GFF482 are separated by 17 nucleotides GFF472 - hypothetical protein, at 510,753 to 511,052 GFF472 GFF473 - Cytochrome c551/c552, at 511,127 to 511,426 GFF473 GFF474 - FIG00537682: hypothetical protein, at 511,451 to 511,966 GFF474 GFF475 - Acetyl-CoA synthetase (EC 6.2.1.1), at 512,104 to 514,101 GFF475 GFF476 - InterPro IPR005134 COGs COG2862, at 514,259 to 514,897 GFF476 GFF477 - Transcriptional regulator, LysR family, at 514,907 to 515,806 GFF477 GFF478 - Rrf2-linked NADH-flavin reductase, at 515,926 to 516,543 GFF478 GFF479 - Fumarate hydratase class II (EC 4.2.1.2), at 516,595 to 517,992 GFF479 GFF480 - Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1), at 518,495 to 519,751 GFF480 GFF481 - Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1), at 519,773 to 520,948 GFF481 GFF482 - Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1), at 520,966 to 521,985 GFF482
Locus Name Description Strand Phenotype
GFF472 hypothetical protein - insig.
GFF473 Cytochrome c551/c552 + sig.
GFF474 FIG00537682: hypothetical protein - insig.
GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) - cofit
GFF476 InterPro IPR005134 COGs COG2862 + insig.
GFF477 Transcriptional regulator, LysR family - insig.
GFF478 Rrf2-linked NADH-flavin reductase + insig.
GFF479 Fumarate hydratase class II (EC 4.2.1.2) - insig.
GFF480 Glycine betaine/L-proline transport ATP-binding protein ProV (TC 3.A.1.12.1) + insig.
GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) + insig.
GFF482 Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) + insig.

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