Gene info for PS417_23660 in Pseudomonas simiae WCS417

Updated annotation (from data): Catechol 1,2-dioxygenase (EC 1.13.11.1)
Rationale: Specifically important for utilizing L-Tryptophan. Automated validation from mutant phenotype: the predicted function (CATECHOL-12-DIOXYGENASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: catechol 1,2-dioxygenase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 5,116,586 to 5,117,515
See nucleotide sequence around PS417_23660 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586033319, uniprot: A0A1N7UF03

Nearby Genes

500 ntPS417_23635 and PS417_23640 are separated by 123 nucleotidesPS417_23640 and PS417_23645 overlap by 55 nucleotidesPS417_23645 and PS417_23650 are separated by 136 nucleotidesPS417_23650 and PS417_23655 are separated by 144 nucleotidesPS417_23655 and PS417_23660 are separated by 104 nucleotidesPS417_23660 and PS417_23665 are separated by 41 nucleotidesPS417_23665 and PS417_23670 are separated by 12 nucleotidesPS417_23670 and PS417_23675 are separated by 114 nucleotidesPS417_23675 and PS417_23680 are separated by 133 nucleotidesPS417_23680 and PS417_23685 are separated by 312 nucleotides PS417_23635: PS417_23635 - membrane protein, at 5,111,346 to 5,112,110 _23635 PS417_23640: PS417_23640 - LysR family transcriptional regulator, at 5,112,234 to 5,113,124 _23640 PS417_23645: PS417_23645 - amino acid permease, at 5,113,070 to 5,114,476 _23645 PS417_23650: PS417_23650 - Kynureninase (EC 3.7.1.3) (from data), at 5,114,613 to 5,115,863 _23650 PS417_23655: PS417_23655 - AsnC family transcriptional regulator, at 5,116,008 to 5,116,481 _23655 PS417_23660: PS417_23660 - Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data), at 5,116,586 to 5,117,515 _23660 PS417_23665: PS417_23665 - Muconolactone isomerase (EC 5.3.3.4) (from data), at 5,117,557 to 5,117,847 _23665 PS417_23670: PS417_23670 - Muconate cycloisomerase (EC 5.5.1.1) (from data), at 5,117,860 to 5,118,987 _23670 PS417_23675: PS417_23675 - transcriptional regulator, at 5,119,102 to 5,119,977 _23675 PS417_23680: PS417_23680 - AraC family transcriptional regulator, at 5,120,111 to 5,121,091 _23680 PS417_23685: PS417_23685 - anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC: 1.14.12.1] (from data), at 5,121,404 to 5,122,795 _23685
Locus Name Description Strand Phenotype
PS417_23635 PS417_23635 membrane protein - insig.
PS417_23640 PS417_23640 LysR family transcriptional regulator + insig.
PS417_23645 PS417_23645 amino acid permease - insig.
PS417_23650 PS417_23650 Kynureninase (EC 3.7.1.3) (from data) - strong
PS417_23655 PS417_23655 AsnC family transcriptional regulator + strong
PS417_23660 PS417_23660 Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data) - strong
PS417_23665 PS417_23665 Muconolactone isomerase (EC 5.3.3.4) (from data) - strong
PS417_23670 PS417_23670 Muconate cycloisomerase (EC 5.5.1.1) (from data) - strong
PS417_23675 PS417_23675 transcriptional regulator + strong
PS417_23680 PS417_23680 AraC family transcriptional regulator - strong
PS417_23685 PS417_23685 anthranilate 1,2-dioxygenase (deaminating, decarboxylating) large subunit [EC: 1.14.12.1] (from data) + strong

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