Gene info for GFF4613 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, + strand, nucleotides 255,539 to 256,426
See nucleotide sequence around GFF4613 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4608 and GFF4609 are separated by 39 nucleotidesGFF4609 and GFF4610 are separated by 47 nucleotidesGFF4610 and GFF4611 are separated by 70 nucleotidesGFF4611 and GFF4612 are separated by 140 nucleotidesGFF4612 and GFF4613 are separated by 116 nucleotidesGFF4613 and GFF4614 are separated by 9 nucleotidesGFF4614 and GFF4615 are separated by 27 nucleotidesGFF4615 and GFF4616 are separated by 26 nucleotidesGFF4616 and GFF4617 overlap by 4 nucleotidesGFF4617 and GFF4618 are separated by 110 nucleotides GFF4608 - 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17), at 249,037 to 251,436 GFF4608 GFF4609 - FIG00581832: hypothetical protein, at 251,476 to 251,910 GFF4609 GFF4610 - Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8), at 251,958 to 253,754 GFF4610 GFF4611 - Predicted transcriptional regulator for fatty acid degradation FadP, TetR family, at 253,825 to 254,523 GFF4611 GFF4612 - Short-chain dehydrogenase/reductase SDR, at 254,664 to 255,422 GFF4612 GFF4613 - Transcriptional regulator, LysR family, at 255,539 to 256,426 GFF4613 GFF4614 - Transcriptional regulator, AraC family, at 256,436 to 257,287 GFF4614 GFF4615 - 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase, at 257,315 to 258,163 GFF4615 GFF4616 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 258,190 to 258,936 GFF4616 GFF4617 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 258,933 to 259,667 GFF4617 GFF4618 - Hexuronate utilization operon transcriptional repressor ExuR, at 259,778 to 260,485 GFF4618
Locus Name Description Strand Phenotype
GFF4608 3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17) - cofit
GFF4609 FIG00581832: hypothetical protein - no data
GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) - sig.
GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family - strong
GFF4612 Short-chain dehydrogenase/reductase SDR - insig.
GFF4613 Transcriptional regulator, LysR family + no data
GFF4614 Transcriptional regulator, AraC family - insig.
GFF4615 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase - insig.
GFF4616 Oxidoreductase, short-chain dehydrogenase/reductase family - no data
GFF4617 2-keto-3-deoxy-L-fuconate dehydrogenase - insig.
GFF4618 Hexuronate utilization operon transcriptional repressor ExuR + insig.

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