Gene info for GFF4558 in Variovorax sp. SCN45

Annotation: RNA polymerase ECF-type sigma factor
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, - strand, nucleotides 194,651 to 195,193
See nucleotide sequence around GFF4558 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4553 and GFF4554 are separated by 62 nucleotidesGFF4554 and GFF4555 are separated by 103 nucleotidesGFF4555 and GFF4556 overlap by 4 nucleotidesGFF4556 and GFF4557 overlap by 4 nucleotidesGFF4557 and GFF4558 overlap by 4 nucleotidesGFF4558 and GFF4559 are separated by 3 nucleotidesGFF4559 and GFF4560 are separated by 97 nucleotidesGFF4560 and GFF4561 are separated by 108 nucleotidesGFF4561 and GFF4562 are separated by 5 nucleotidesGFF4562 and GFF4563 are separated by 129 nucleotides GFF4553 - RNA chaperone ProQ, at 190,043 to 191,032 GFF4553 GFF4554 - Protease HtpX, at 191,095 to 191,970 GFF4554 GFF4555 - Putative transmembrane protein, at 192,074 to 192,829 GFF4555 GFF4556 - hypothetical protein, at 192,826 to 193,626 GFF4556 GFF4557 - Dihydroorotase (EC 3.5.2.3), at 193,623 to 194,654 GFF4557 GFF4558 - RNA polymerase ECF-type sigma factor, at 194,651 to 195,193 GFF4558 GFF4559 - Uncharacterized membrane protein Rmet_3714, at 195,197 to 195,406 GFF4559 GFF4560 - hypothetical protein, at 195,504 to 196,235 GFF4560 GFF4561 - Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27), at 196,344 to 197,867 GFF4561 GFF4562 - Biotin synthase related domain containing protein, at 197,873 to 199,126 GFF4562 GFF4563 - Ferredoxin, 2Fe-2S, at 199,256 to 199,615 GFF4563
Locus Name Description Strand Phenotype
GFF4553 RNA chaperone ProQ + insig.
GFF4554 Protease HtpX - insig.
GFF4555 Putative transmembrane protein - insig.
GFF4556 hypothetical protein - insig.
GFF4557 Dihydroorotase (EC 3.5.2.3) - strong
GFF4558 RNA polymerase ECF-type sigma factor - insig.
GFF4559 Uncharacterized membrane protein Rmet_3714 - no data
GFF4560 hypothetical protein - insig.
GFF4561 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) - insig.
GFF4562 Biotin synthase related domain containing protein - insig.
GFF4563 Ferredoxin, 2Fe-2S + insig.

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