Gene info for GFF4489 in Variovorax sp. SCN45

Annotation: 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191)
Type 1: Protein-coding gene
Located on scaffold scaffold00000010, - strand, nucleotides 134,220 to 135,434
See nucleotide sequence around GFF4489 or for all of scaffold scaffold00000010

Nearby Genes

500 ntGFF4484 and GFF4485 are separated by 49 nucleotidesGFF4485 and GFF4486 are separated by 45 nucleotidesGFF4486 and GFF4487 are separated by 698 nucleotidesGFF4487 and GFF4488 are separated by 134 nucleotidesGFF4488 and GFF4489 are separated by 98 nucleotidesGFF4489 and GFF4490 are separated by 19 nucleotidesGFF4490 and GFF4491 overlap by 26 nucleotidesGFF4491 and GFF4492 overlap by 4 nucleotidesGFF4492 and GFF4493 overlap by 4 nucleotidesGFF4493 and GFF4494 are separated by 80 nucleotides GFF4484 - ATP-dependent protease subunit HslV (EC 3.4.25.2), at 127,766 to 128,320 GFF4484 GFF4485 - FIG00715336: hypothetical protein, at 128,370 to 130,034 GFF4485 GFF4486 - DksA family protein PA5536 (no Zn-finger), at 130,080 to 130,754 GFF4486 GFF4487 - putative secreted protein, at 131,453 to 132,931 GFF4487 GFF4488 - Metal-binding GTPase YjiA, at 133,066 to 134,121 GFF4488 GFF4489 - 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191), at 134,220 to 135,434 GFF4489 GFF4490 - Site-specific tyrosine recombinase XerC, at 135,454 to 136,470 GFF4490 GFF4491 - no description, at 136,445 to 137,080 GFF4491 GFF4492 - Protein of unknown function DUF484, at 137,077 to 137,781 GFF4492 GFF4493 - Diaminopimelate epimerase (EC 5.1.1.7), at 137,778 to 138,662 GFF4493 GFF4494 - hypothetical protein, at 138,743 to 139,057 GFF4494
Locus Name Description Strand Phenotype
GFF4484 ATP-dependent protease subunit HslV (EC 3.4.25.2) - insig.
GFF4485 FIG00715336: hypothetical protein - strong
GFF4486 DksA family protein PA5536 (no Zn-finger) - no data
GFF4487 putative secreted protein + sig.
GFF4488 Metal-binding GTPase YjiA - cofit
GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) - insig.
GFF4490 Site-specific tyrosine recombinase XerC - strong
GFF4491 no description - insig.
GFF4492 Protein of unknown function DUF484 - strong
GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) - no data
GFF4494 hypothetical protein - insig.

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